Pre_GI: BLASTP Hits

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Query: NC_012583:440420:459733 Vibrio cholerae O395 chromosome chromosome II, complete sequence

Start: 459733, End: 460008, Length: 276

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae O395 is a classical O1 serotype strain of the Ogawa biotype. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016945:370471:430855430855431130276Vibrio cholerae IEC224 chromosome II, complete sequencehypothetical protein1e-48191
NC_012667:931390:935842935842936117276Vibrio cholerae MJ-1236 chromosome 2, complete genomehypothetical protein1e-48191
NC_012580:301500:326564326564326839276Vibrio cholerae M66-2 chromosome II, complete sequencehypothetical protein1e-48191
NC_009456:787322:803934803934804209276Vibrio cholerae O395 chromosome 1, complete sequencehypothetical protein1e-48191
NC_002506:370629:431036431036431311276Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completehypothetical protein1e-48191
NC_016446:119914:131583131583131852270Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completehypothetical protein2e-47187
NC_017269:303500:328075328075328344270Vibrio cholerae LMA3984-4 chromosome II, complete sequencehypothetical protein2e-47187
NC_010803:1436397:143846214384621438731270Chlorobium limicola DSM 245, complete genomehypothetical protein5e-1476.3
NC_013194:963735:9685139685139699701458Candidatus Accumulibacter phosphatis clade IIA str. UW-1, complete1e-1375.1
NC_010814:2275199:228578122857812286050270Geobacter lovleyi SZ, complete genomehypothetical protein3e-1270.5
NC_013173:2884887:292919829291982929467270Desulfomicrobium baculatum DSM 4028, complete genomehypothetical protein4e-0960.1
NC_015581:1731120:173297617329761733242267Thioalkalimicrobium cyclicum ALM1 chromosome, complete genomehypothetical protein1e-0755.1
NC_010803:634497:640612640612640917306Chlorobium limicola DSM 245, complete genomehypothetical protein3e-0753.5
NC_007626:1746475:177779217777921778052261Magnetospirillum magneticum AMB-1, complete genomehypothetical protein8e-0752.4
NC_013960:243884:254223254223254480258Nitrosococcus halophilus Nc4 chromosome, complete genomehypothetical protein9e-0752.4
NC_015052:1313311:133483013348301335117288Bifidobacterium longum subsp. infantis 157F, complete genomehypothetical protein1e-0651.6
NC_015873:238187:250789250789251055267Megasphaera elsdenii DSM 20460, complete genomehypothetical protein2e-0650.8
NC_017294:403422:409072409072409332261Candidatus Arthromitus sp. SFB-mouse-Yit, complete genomehypothetical protein3e-0650.8
NC_009633:337706:339512339512339778267Alkaliphilus metalliredigens QYMF chromosome, complete genomehypothetical protein4e-0650.1
NC_014221:1518583:153075515307551531015261Truepera radiovictrix DSM 17093 chromosome, complete genomehypothetical protein5e-0649.7