Pre_GI Gene

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Host: NC_012580 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012580:353273 Vibrio cholerae M66-2 chromosome II, complete sequence

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae M66-2 was isolated from the 1937 cholera outbreak in the Makassar area of Indonesia. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
353273353545273hypothetical proteinBLASTP
3537103547141005microcin immunity protein MccFQuickGO ontologyBLASTP
354906355163258hypothetical proteinBLASTP
355870356223354killer proteinQuickGO ontologyBLASTP
356234356551318antidote proteinQuickGO ontologyBLASTP
356731357054324hypothetical proteinBLASTP
357791358189399Glyoxalasebleomycin resistance proteinQuickGO ontologyBLASTP
358384358635252hypothetical proteinBLASTP
358809359162354hypothetical proteinBLASTP
359374359616243hypothetical proteinBLASTP
359823360146324hypothetical proteinBLASTP
360947361435489OsmC-like proteinQuickGO ontologyBLASTP
361620362225606hypothetical proteinBLASTP
362410362676267hypothetical proteinBLASTP
362663362908246hypothetical proteinBLASTP
362992363798807hypothetical proteinBLASTP
364007364108102hypothetical proteinBLASTP
364090364272183hypothetical proteinBLASTP
364469364894426N-acetyltransferase GCN5QuickGO ontologyBLASTP
365034365624591hypothetical proteinBLASTP
365778366137360Glyoxalasebleomycin resistance proteinQuickGO ontologyBLASTP
366284366937654hypothetical protein
367746368042297Stress responsive alpha-beta barrelQuickGO ontologyBLASTP
368196368588393hypothetical proteinBLASTP
369634370506873ISVch4 transposase OrfAQuickGO ontologyBLASTP
370503370847345ISVch4 transposase OrfBQuickGO ontologyBLASTP
3711993722361038hypothetical proteinBLASTP
372908373261354killer proteinQuickGO ontologyBLASTP
373272373589318antidote proteinQuickGO ontologyBLASTP
373724374200477N-acetyltransferase GCN5QuickGO ontologyBLASTP
374337374852516Lipocalin-like proteinQuickGO ontologyBLASTP
374988375278291relE proteinQuickGO ontologyBLASTP
375268375516249antitoxin of toxin-antitoxin stability system StbD familyQuickGO ontologyBLASTP
375781375972192hypothetical proteinBLASTP
376048376740693DNA methylase N-4N-6QuickGO ontologyBLASTP
377012377437426hypothetical proteinBLASTP
377615378040426hypothetical proteinBLASTP
378191378721531hypothetical proteinBLASTP
378859379359501hypothetical proteinBLASTP
379485379913429hypothetical proteinBLASTP