Pre_GI Gene

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Host: NC_010498 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010498:1094000 Escherichia coli SMS-3-5, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli SMS-3-5 was isolated from a toxic-metal contaminated site, Shipyard Creek, Charleston, South Carolina, USA. This strain is highly resistant to a number of antibiotics. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
10945131095496984ISL3 family transposaseQuickGO ontologyBLASTP
109614810971821035phosphotriesterase family proteinQuickGO ontologyBLASTP
10971851098150966hypothetical proteinBLASTP
10982071098965759hypothetical proteinBLASTP
109897911001931215PfkB family DNA-binding proteinkinaseQuickGO ontologyBLASTP
11019451102355411IS2 transposase orfAQuickGO ontologyBLASTP
11023131103218906IS2 transposase orfBQuickGO ontologyBLASTP
110314311043091167lyaseQuickGO ontologyBLASTP
110453211058301299anaerobic C4-dicarboxylate transporterQuickGO ontologyBLASTP
11058891106608720aspartate racemaseQuickGO ontologyBLASTP
11069481107847900LysR family transcriptional regulatorQuickGO ontologyBLASTP
11081171108251135hypothetical protein
110920111104931293d-galactonate transporterQuickGO ontologyBLASTP
111061311117611149mandelate racemasemuconate lactonizing enzyme family proteinQuickGO ontologyBLASTP
111175811123756182-dehydro-3-deoxyphosphogluconate aldolase4-hydroxy-2-oxoglutarate aldolase-like proteinQuickGO ontologyBLASTP
111235911132378792-dehydro-3-deoxygalactonokinaseQuickGO ontologyBLASTP
11132341113923690galactonate operon transcriptional repressorQuickGO ontologyBLASTP
11147221114892171hypothetical protein
11151551115466312IS911 transposase orfAQuickGO ontologyBLASTP
11155861116332747IS911 transposase orfBQuickGO ontologyBLASTP