Pre_GI Gene

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Host: NC_018080 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_018080:1834754 Pseudomonas aeruginosa DK2 chromosome, complete genome

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
1834754183583910863-phosphoserinephosphohydroxythreonine aminotransferaseQuickGO ontologyBLASTP
183583918369361098chorismate mutaseQuickGO ontologyBLASTP
183700518381141110histidinol-phosphate aminotransferaseQuickGO ontologyBLASTP
183810718403472241bifunctional cyclohexadienyl dehydrogenase 3-phosphoshikimate 1-carboxyvinyltransferaseQuickGO ontologyBLASTP
18403471841036690cytidylate kinaseQuickGO ontologyBLASTP
18413041842983168030S ribosomal protein S1QuickGO ontologyBLASTP
18431201843404285integration host factor subunit betaQuickGO ontologyBLASTP
18434381843740303hypothetical proteinBLASTP
184402518450531029O-antigen chain length regulatorQuickGO ontologyBLASTP
184530018463701071UDP-N-acetylglucosamine 2-epimeraseQuickGO ontologyBLASTP
184634818476641317UDP-N-acetyl-D-mannosaminuronate dehydrogenaseQuickGO ontologyBLASTP
18488901849033144hypothetical proteinBLASTP
18490401849393354hypothetical protein
18493931849701309hypothetical proteinBLASTP
18497281850555828hypothetical proteinBLASTP
18505521851529978hypothetical proteinBLASTP
185153718525801044Glycosyl transferase family 2QuickGO ontologyBLASTP
185358318557242142zinc-binding dehydrogenaseQuickGO ontologyBLASTP
185573318575651833heparinase IIIIIQuickGO ontologyBLASTP
185756218587791218group 1 glycosyl transferaseQuickGO ontologyBLASTP
18587761859375600undecaprenyl-phosphate galactose phosphotransferaseQuickGO ontologyBLASTP
18593721860007636Trimeric LpxA-like family proteinQuickGO ontologyBLASTP
186023518612541020aminotransferaseQuickGO ontologyBLASTP