Pre_GI: BLASTP Hits

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Query: NC_004605:741000:749250 Vibrio parahaemolyticus RIMD 2210633 chromosome II, complete

Start: 749250, End: 750158, Length: 909

Host Lineage: Vibrio parahaemolyticus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a clinical strain isolated in 1996 in Osaka, Japan. It contains a type III secretion system which may enable colonization and penetration of the host intestinal epithelial layer, and possibly lead to septicemia. The genome contains multipe chromosomal rearrangements as compared to Vibrio cholerae. The organism also produces a hemolysin (thermostable direct hemolysin - TDH) that is particular to Vibrio parahaemolyticus. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. This species causes food poisoning (gastroenteritis) in countries that have elevated levels of seafood consumption such as Japan.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_005140:660305:668174668174669025852Vibrio vulnificus YJ016 chromosome II, complete sequencetranscriptional regulator2e-73276
NC_014966:638355:646226646226647077852Vibrio vulnificus MO6-24/O chromosome II, complete sequencetranscriptional regulator2e-73275
NC_004460:81687:895758957590405831Vibrio vulnificus CMCP6 chromosome II, complete sequenceTranscriptional regulator6e-69261
NC_006512:2211654:223007222300722230914843Idiomarina loihiensis L2TR, complete genomeTranscriptional regulator, LysR family1e-1584
NC_016622:82418:103229103229104170942Azospirillum lipoferum 4B, complete genomeLysR family transcriptional regulator2e-1377
NC_014377:1512217:152634615263461527242897Thermosediminibacter oceani DSM 16646 chromosome, complete genometranscriptional regulator, LysR family3e-1376.3
NC_010320:143109:145277145277146167891Thermoanaerobacter sp. X514 chromosome, complete genomeLysR family transcriptional regulator1e-1274.3
NC_008314:1559102:156309115630911564044954Ralstonia eutropha H16 chromosome 2, complete sequenceactivator of cbb operon, LysR-family regulator3e-1272.8
NC_020064:3157656:317869831786983179582885Serratia marcescens FGI94, complete genometranscriptional regulator5e-1272
NC_015557:1232772:125157212515721252495924Hydrogenobaculum sp. 3684 chromosome, complete genometranscriptional regulator, LysR family8e-1271.2
NC_015587:1232642:125144212514421252365924Hydrogenobaculum sp. SHO chromosome, complete genometranscriptional regulator, LysR family8e-1271.2
NC_020411:1232962:125176712517671252690924Hydrogenobaculum sp. HO, complete genometranscriptional regulator, LysR family8e-1271.2
NC_011126:1241655:126042712604271261350924Hydrogenobaculum sp. Y04AAS1, complete genometranscriptional regulator, LysR family9e-1271.2
NC_010725:750911:772714772714773592879Methylobacterium populi BJ001, complete genometranscriptional regulator, LysR family1e-1170.5
NC_015565:348941:350352350352351260909Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeLysR family transcriptional regulator1e-1170.5
NC_007519:64157:803788037881283906Desulfovibrio alaskensis G20 chromosome, complete genomeLysR family transcriptional regulator2e-1170.1
NC_012811:1105395:112754111275411128443903Methylobacterium extorquens AM1 megaplasmid, complete sequenceTranscriptional regulator, LysR family2e-1170.1
NC_014618:2139639:215062821506282151503876Enterobacter cloacae SCF1 chromosome, complete genomeLysR family transcriptional regulator3e-1169.3
NC_009648:4656187:466888646688864669719834Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genometranscriptional regulator HdfR4e-1168.9
NC_012779:2064582:2070273207027320712741002Edwardsiella ictaluri 93-146, complete genomeHTH-type transcriptional regulator PecT6e-1168.6
NC_015556:130437:158446158446159399954Pseudomonas fulva 12-X chromosome, complete genometranscriptional regulator, LysR family7e-1168.2
NC_010520:3938490:394191639419163942797882Clostridium botulinum A3 str. Loch Maree, complete genometranscriptional regulator, LysR family2e-1067
NC_020829:2022000:202767020276702028554885Pseudomonas denitrificans ATCC 13867, complete genometranscriptional regulator2e-1067
NC_016111:581143:581143581143581982840Streptomyces cattleya NRRL 8057, complete genomeTranscriptional regulator, LysR family protein1e-1067
NC_012658:3923546:392697539269753927856882Clostridium botulinum Ba4 str. 657 chromosome, complete genomeLysR family transcriptional regulator2e-1066.6
NC_009617:4436837:443683744368374437712876Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeLysR family transcriptional regulator2e-1066.6
NC_009832:1664238:167195616719561672858903Serratia proteamaculans 568, complete genometranscriptional regulator, LysR family2e-1066.6
NC_014121:3188928:319290931929093193790882Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeLysR family transcriptional regulator3e-1066.2
NC_012563:4101000:410445641044564105337882Clostridium botulinum A2 str. Kyoto, complete genometranscriptional regulator, LysR family2e-1066.2
NC_009495:3832500:383593838359383836819882Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeLysR family transcriptional regulator2e-1066.2
NC_009697:3809044:381247238124723813353882Clostridium botulinum A str. ATCC 19397 chromosome, completeLysR family transcriptional regulator2e-1066.2
NC_009698:3706154:370958237095823710463882Clostridium botulinum A str. Hall chromosome, complete genomeLysR family transcriptional regulator2e-1066.2
NC_009699:3940984:394441639444163945297882Clostridium botulinum F str. Langeland chromosome, complete genomeLysR family transcriptional regulator2e-1066.2
NC_017297:3939328:394276039427603943641882Clostridium botulinum F str. 230613 chromosome, complete genomeLysR family transcriptional regulator2e-1066.2
NC_010516:3903867:390729639072963908177882Clostridium botulinum B1 str. Okra, complete genometranscriptional regulator, LysR family2e-1066.2
NC_013592:2968500:299491129949112995762852Dickeya dadantii Ech586, complete genometranscriptional regulator, LysR family2e-1066.2
NC_015942:668775:672839672839673759921Acidithiobacillus ferrivorans SS3 chromosome, complete genomeLysR family transcriptional regulator4e-1065.9
NC_013921:80856:955729557296465894Thermoanaerobacter italicus Ab9 chromosome, complete genometranscriptional regulator, LysR family4e-1065.9
NC_013421:4714478:474565947456594746588930Pectobacterium wasabiae WPP163, complete genometranscriptional regulator, LysR family3e-1065.9
NC_014153:2187409:218740921874092188347939Thiomonas intermedia K12 chromosome, complete genometranscriptional regulator, LysR family3e-1065.9
NC_014209:136152:145153145153146046894Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,transcriptional regulator, LysR family5e-1065.5
NC_015703:1087809:110826211082621109158897Runella slithyformis DSM 19594 chromosome, complete genomeLysR family transcriptional regulator4e-1065.5
NC_016002:2534516:254939825493982550300903Pseudogulbenkiania sp. NH8B, complete genomeLysR family transcriptional regulator4e-1065.5
NC_013730:5914142:593181359318135932709897Spirosoma linguale DSM 74, complete genometranscriptional regulator, LysR family4e-1065.5
NC_015422:1:130181301813860843Alicycliphilus denitrificans K601 chromosome, complete genomeLysR family transcriptional regulator6e-1065.1
NC_008027:3844355:388407038840703884960891Pseudomonas entomophila L48, complete genometranscriptional regulator CynR6e-1065.1
NC_012778:207415:212088212088212945858Eubacterium eligens ATCC 27750, complete genomeLysR family transcriptional regulator, transcription activator of glutamate synthase operon6e-1065.1
NC_012881:3520956:354014435401443541031888Desulfovibrio salexigens DSM 2638, complete genometranscriptional regulator, LysR family6e-1065.1
NC_011958:923789:928653928653929534882Rhodobacter sphaeroides KD131 chromosome 2, complete genomeTranscriptional regulator, LysR family9e-1064.7
NC_009439:2337024:235478523547852355639855Pseudomonas mendocina ymp, complete genomeLysR family transcriptional regulator8e-1064.7
NC_020211:1655826:165757116575711658521951Serratia marcescens WW4, complete genometranscriptional activator of cyn operon, autorepressor8e-1064.7
NC_020181:3585898:359903435990343599915882Enterobacter aerogenes EA1509E, complete genomeLysR family regulatory protein CidR7e-1064.7
NC_007494:867901:873585873585874466882Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequencetranscriptional regulator, LysR family9e-1064.3
NC_015410:2838132:284148928414892842343855Pseudomonas mendocina NK-01 chromosome, complete genomeLysR family transcriptional regulator1e-0964.3
NC_012214:1438476:145355614535561454485930Erwinia pyrifoliae Ep1/96, complete genomeLysR-family transcriptional regulator1e-0964.3
NC_015733:2581324:259402425940242594977954Pseudomonas putida S16 chromosome, complete genomeLysR family transcriptional regulator1e-0963.9
NC_009667:1341000:135994713599471360798852Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequenceLysR family transcriptional regulator2e-0963.5
NC_014650:1862165:186839718683971869281885Geobacillus sp. Y4.1MC1 chromosome, complete genomeLysR family transcriptional regulator2e-0963.5
NC_015660:1869962:188570818857081886592885Geobacillus thermoglucosidasius C56-YS93 chromosome, completeLysR family transcriptional regulator2e-0963.5
NC_008391:1210451:122516312251631226068906Burkholderia cepacia AMMD chromosome 2, complete sequencetranscriptional regulator, LysR family2e-0963.5
NC_014618:4657719:468652846865284687457930Enterobacter cloacae SCF1 chromosome, complete genomeLysR family transcriptional regulator2e-0963.2
NC_010170:1324758:134190413419041342812909Bordetella petrii, complete genometranscriptional regulator, LysR-family2e-0963.2
NC_009439:442890:484747484747485631885Pseudomonas mendocina ymp, complete genomeLysR family transcriptional regulator3e-0962.8
NC_006350:1084930:108493010849301085826897Burkholderia pseudomallei K96243 chromosome 1, complete sequenceLysR family transcriptional regulator3e-0962.8
NC_016514:1183356:120316712031671204048882Enterobacter cloacae EcWSU1 chromosome, complete genomeHTH-type transcriptional regulator BudR3e-0962.8
NC_019940:2893535:291169629116962912598903Thioflavicoccus mobilis 8321 chromosome, complete genometranscriptional regulator3e-0962.8
NC_005085:2014987:204352020435202044464945Chromobacterium violaceum ATCC 12472, complete genomecyn operon transcriptional regulator3e-0962.8
NC_014500:3175283:320822432082243209126903Dickeya dadantii 3937 chromosome, complete genomeLysR family transcriptional regulator4e-0962.4
NC_009717:271385:2770072770072781341128Xanthobacter autotrophicus Py2 plasmid pXAUT01, complete sequenceLysR family transcriptional regulator4e-0962.4
NC_013192:1504310:151658915165891517440852Leptotrichia buccalis DSM 1135, complete genometranscriptional regulator, LysR family4e-0962.4
NC_020209:945000:960556960556961392837Pseudomonas poae RE*1-1-14, complete genomeLysR family transcriptional regulator3e-0962.4
NC_016612:1790256:179185817918581792739882Klebsiella oxytoca KCTC 1686 chromosome, complete genomeLysR family transcriptional regulator5e-0962
NC_013971:2478676:248239124823912483320930Erwinia amylovora ATCC 49946 chromosome, complete genomeNADH dehydrogenase operon transcriptional regulator6e-0962
NC_013961:2441148:244486324448632445792930Erwinia amylovora, complete genomeprobable HTH-type transcriptional regulator lrhA6e-0962
NC_005042:165530:168990168990169943954Prochlorococcus marinus subsp. marinus str. CCMP1375, completeRuBisCO operon transcriptional regulator7e-0961.6
NC_020272:20435:325493254933445897Bacillus amyloliquefaciens IT-45, complete genomeHTH-type transcriptional regulator YwbI6e-0961.6
NC_011894:6888562:691884769188476919731885Methylobacterium nodulans ORS 2060, complete genometranscriptional regulator, LysR family9e-0961.2
NC_009255:916000:918699918699919616918Burkholderia vietnamiensis G4 chromosome 2, complete sequenceLysR family transcriptional regulator8e-0961.2
NC_010067:3310336:331153233115323312416885Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein8e-0961.2
NC_006905:4405301:444400344440034444890888Salmonella enterica subsp. enterica serovar Choleraesuis strputative transcriptional regulator, LysR family8e-0961.2
NC_011094:4361238:439994743999474400834888Salmonella enterica subsp. enterica serovar Schwarzengrund strLysR family regulatory protein8e-0961.2
NC_020126:2216926:222336322233632224265903Myxococcus stipitatus DSM 14675, complete genomeLysR family transcriptional regulator8e-0961.2
NC_013947:3406000:342305334230533423895843Stackebrandtia nassauensis DSM 44728 chromosome, complete genometranscriptional regulator, LysR family1e-0860.8
NC_010557:207846:215435215435216322888Burkholderia ambifaria MC40-6 chromosome 3, complete sequencetranscriptional regulator, LysR family1e-0860.8
NC_010002:4287439:431379643137964314698903Delftia acidovorans SPH-1, complete genometranscriptional regulator, LysR family1e-0860.8
NC_014964:2199252:220595422059542206847894Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completeLysR substrate-binding protein1e-0860.8
NC_014538:73272:892548925490147894Thermoanaerobacter sp. X513 chromosome, complete genomeLysR family transcriptional regulator1e-0860.8
NC_010320:33814:493894938950282894Thermoanaerobacter sp. X514 chromosome, complete genomeLysR family transcriptional regulator1e-0860.8
NC_010321:2207364:221881022188102219703894Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completeLysR family transcriptional regulator1e-0860.8
NC_006510:887545:914005914005914919915Geobacillus kaustophilus HTA426, complete genometranscriptional regulator (LysR family)1e-0860.8
NC_005810:3493607:351208835120883512969882Yersinia pestis biovar Microtus str. 91001, complete genometranscriptional regulator HdfR1e-0860.8
NC_009832:2460027:247310724731072473994888Serratia proteamaculans 568, complete genometranscriptional regulator, LysR family1e-0860.8
NC_013929:4927380:494002549400254940915891Streptomyces scabiei 87.22 chromosome, complete genomeLysR family transcriptional regulator2e-0860.5
NC_021150:2451500:247040624704062471359954Azotobacter vinelandii CA6, complete genomeLysR family transcriptional regulator protein2e-0860.5
NC_012560:2451500:247039424703942471347954Azotobacter vinelandii DJ, complete genomeLysR family transcriptional regulator protein2e-0860.5
NC_011761:684969:690101690101691051951Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completeLysR family transcriptional regulator1e-0860.5
NC_021066:3028421:302842130284213029365945Raoultella ornithinolytica B6, complete genometranscriptional regulator1e-0860.5
NC_016935:4233223:430236243023624303225864Paenibacillus mucilaginosus 3016 chromosome, complete genomeLysR family transcriptional regulator1e-0860.5
NC_008321:3232000:325273932527393253650912Shewanella sp. MR-4, complete genometranscriptional regulator, LysR family1e-0860.5
NC_007509:1043602:106512310651231066031909Burkholderia sp. 383 chromosome 3, complete sequencetranscriptional regulator, LysR family1e-0860.5
NC_017986:5833819:583607958360795836951873Pseudomonas putida ND6 chromosome, complete genomecatBC operon regulator1e-0860.5
NC_011206:863987:869119869119870027909Acidithiobacillus ferrooxidans ATCC 53993, complete genometranscriptional regulator, LysR family2e-0860.1
NC_016776:1470596:149006714900671490963897Bacteroides fragilis 638R, complete genomeputative transcriptional regulator2e-0860.1
NC_009485:1222697:122572012257201226622903Bradyrhizobium sp. BTAi1 chromosome, complete genomeLysR family transcriptional regulator2e-0860.1
NC_018080:6048516:609535060953506096267918Pseudomonas aeruginosa DK2 chromosome, complete genometranscriptional regulator2e-0860.1
NC_015690:4469775:454605745460574546920864Paenibacillus mucilaginosus KNP414 chromosome, complete genomeLysR family transcriptional regulator2e-0860.1
NC_006087:1334500:133839513383951339249855Leifsonia xyli subsp. xyli str. CTCB07, complete genometranscriptional regulator, LysR family2e-0859.7
NC_014098:3133440:313717031371703138072903Bacillus tusciae DSM 2912 chromosome, complete genometranscriptional regulator, LysR family4e-0859.3
NC_009648:2252757:225354722535472254419873Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeLysR family transcriptional regulator4e-0859.3
NC_012731:2974745:297695029769502977822873Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeLysR family transcriptional regulator4e-0859.3
NC_016845:3024041:302483130248313025703873Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,LysR family transcriptional regulator4e-0859.3
NC_019842:3921424:393001339300133930891879Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,HTH-type transcriptional regulator4e-0859.3
NC_010725:3992948:4023332402333240243421011Methylobacterium populi BJ001, complete genometranscriptional regulator, LysR family3e-0859.3
NC_007492:2771021:279528727952872796189903Pseudomonas fluorescens PfO-1, complete genomeTranscriptional Regulator, LysR family3e-0859.3
NC_020410:3868573:387724638772463878154909Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeUncharacterized HTH-type transcriptional regulator ywbI3e-0859.3
NC_017249:7917586:794094879409487941844897Bradyrhizobium japonicum USDA 6, complete genometranscriptional regulator5e-0858.9
NC_013316:2623199:262501926250192625891873Clostridium difficile R20291, complete genomeLysR-family regulatory protein4e-0858.9
NC_009725:3878862:388670838867083887616909Bacillus amyloliquefaciens FZB42, complete genomeputative HTH-type transcriptional regulator4e-0858.9
NC_013315:2531019:254446325444632545335873Clostridium difficile CD196 chromosome, complete genomeLysR family transcriptional regulator4e-0858.9
NC_017179:2539031:255247525524752553347873Clostridium difficile BI1, complete genomeLysR family transcriptional regulator4e-0858.9
NC_010694:891967:895780895780896682903Erwinia tasmaniensis, complete genomePutative transcriptional regulator protein, LysR family4e-0858.9
NC_011283:2323687:234077623407762341648873Klebsiella pneumoniae 342 chromosome, complete genometranscriptional regulator BudR4e-0858.9
NC_015379:4282815:428725542872554288142888Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative Transcription factor, LysR family6e-0858.5
NC_020829:5382500:539514053951405396060921Pseudomonas denitrificans ATCC 13867, complete genomeLysR family transcriptional regulator6e-0858.5
NC_010170:4409683:441792844179284418830903Bordetella petrii, complete genometranscriptional regulator, LysR-family6e-0858.5
NC_013851:3142182:316147431614743162442969Allochromatium vinosum DSM 180 chromosome, complete genometranscriptional regulator, LysR family5e-0858.5
NC_015276:2948923:296983129698312970733903Marinomonas mediterranea MMB-1 chromosome, complete genometranscriptional regulator, LysR family5e-0858.5
NC_009138:3153576:317561431756143176471858Herminiimonas arsenicoxydans, complete genomePutative HTH-type transcriptional regulator protein ptxE5e-0858.5
NC_009659:3384997:341071534107153411572858Janthinobacterium sp. Marseille chromosome, complete genomeLysR family transcriptional regulator5e-0858.5
NC_010498:3023442:302494930249493025866918Escherichia coli SMS-3-5, complete genomeglycine cleavage system transcriptional activator5e-0858.5
NC_011745:3197584:319909131990913200008918Escherichia coli ED1a chromosome, complete genomeDNA-binding transcriptional activator GcvA5e-0858.5
NC_013361:3823347:382485438248543825771918Escherichia coli O26:H11 str. 11368 chromosome, complete genomeDNA-binding transcriptional activator GcvA5e-0858.5
NC_011757:4445343:444986244498624450743882Methylobacterium chloromethanicum CM4, complete genometranscriptional regulator, LysR family5e-0858.5
NC_007511:719493:736224736224737078855Burkholderia sp. 383 chromosome 2, complete sequencetranscriptional regulator, LysR family8e-0858.2
NC_015759:760671:774183774183775061879Weissella koreensis KACC 15510 chromosome, complete genometranscriptional regulator, LysR family protein7e-0858.2
NC_015424:2836920:283692028369202837774855Aeromonas veronii B565 chromosome, complete genomeLysR family transcriptional regulator7e-0858.2
NC_015733:2194676:221286922128692213789921Pseudomonas putida S16 chromosome, complete genomeLysR family transcriptional regulator6e-0858.2
NC_016584:2244966:226159522615952262512918Desulfosporosinus orientis DSM 765 chromosome, complete genometranscriptional regulator6e-0858.2
NC_015687:95918:101128101128102000873Clostridium acetobutylicum DSM 1731 chromosome, complete genomeLysR family transcriptional regulator1e-0757.8
NC_003030:95918:101128101128102000873Clostridium acetobutylicum ATCC 824, complete genomeTranscriptional regulators, LysR family1e-0757.8
NC_017295:95919:101129101129102001873Clostridium acetobutylicum EA 2018 chromosome, complete genomeLysR family transcriptional regulator1e-0757.8
NC_003295:659837:662013662013662882870Ralstonia solanacearum GMI1000, complete genomePROBABLE TRANSCRIPTION REGULATOR PROTEIN1e-0757.8
NC_002973:461712:464317464317465192876Listeria monocytogenes str. 4b F2365, complete genometranscriptional regulator, LysR family1e-0757.8
NC_002516:2306776:232633423263342327287954Pseudomonas aeruginosa PAO1, complete genomeprobable transcriptional regulator9e-0857.8
NC_012997:3651993:366218636621863663103918Teredinibacter turnerae T7901, complete genometranscriptional regulator, LysR family9e-0857.8
NC_010508:2776283:280057828005782801465888Burkholderia cenocepacia MC0-3 chromosome 1, complete sequencetranscriptional regulator, LysR family9e-0857.8
NC_007948:4558000:460970146097014610603903Polaromonas sp. JS666, complete genometranscriptional regulator, LysR family9e-0857.8
NC_009720:813157:819561819561820505945Xanthobacter autotrophicus Py2, complete genomeLysR family transcriptional regulator1e-0757.4
NC_007951:3631772:364615936461593647070912Burkholderia xenovorans LB400 chromosome 1, complete sequenceTranscriptional regulator, LysR family1e-0757.4
NC_009512:755658:779992779992780876885Pseudomonas putida F1, complete genometranscriptional regulator, LysR family1e-0757.4
NC_013850:1753716:175371617537161754630915Klebsiella variicola At-22 chromosome, complete genometranscriptional regulator, LysR family2e-0757
NC_004113:1234048:1250682125068212517221041Thermosynechococcus elongatus BP-1, complete genomeLysR family transcriptional regulator2e-0757
NC_014910:2930860:293798729379872938913927Alicycliphilus denitrificans BC chromosome, complete genomelysr substrate-binding protein2e-0757
NC_009434:608765:634459634459635358900Pseudomonas stutzeri A1501, complete genomeLysR family transcriptional regulator2e-0757
NC_007645:6858465:686243168624316863306876Hahella chejuensis KCTC 2396, complete genomeTranscriptional regulator2e-0757
NC_015563:4629436:463133146313314632233903Delftia sp. Cs1-4 chromosome, complete genomeLysR family transcriptional regulator1e-0757
NC_016612:28451:606586065861569912Klebsiella oxytoca KCTC 1686 chromosome, complete genomeLysR family transcriptional regulator1e-0757
NC_015566:4350080:435592243559224356833912Serratia sp. AS12 chromosome, complete genomeLysR family transcriptional regulator2e-0756.6
NC_011146:3304416:331932433193243320262939Geobacter bemidjiensis Bem, complete genometranscriptional regulator, LysR family2e-0756.6
NC_006814:51500:671766717667829654Lactobacillus acidophilus NCFM, complete genometranscriptional regulator2e-0756.6
NC_009511:2726296:273916127391612740096936Sphingomonas wittichii RW1 chromosome, complete genomeLysR family transcriptional regulator3e-0756.2
NC_009481:2081500:2099147209914721001601014Synechococcus sp. WH 7803 chromosome, complete genomeRuBisCO operon transcriptional regulator3e-0756.2
NC_009997:4091371:409836140983614099299939Shewanella baltica OS195, complete genometranscriptional regulator, LysR family3e-0756.2
NC_016901:4039335:404632540463254047263939Shewanella baltica OS678 chromosome, complete genomeLysR family transcriptional regulator3e-0756.2
NC_010170:1324758:133532013353201336210891Bordetella petrii, complete genometranscriptional regulator, LysR-family3e-0756.2
NC_011184:597496:619422619422620300879Vibrio fischeri MJ11 chromosome I, complete sequencetranscriptional regulator, LysR family3e-0756.2
NC_010623:72500:846708467085584915Burkholderia phymatum STM815 chromosome 2, complete sequencetranscriptional regulator, LysR family3e-0756.2
NC_011000:2732330:279013927901392791041903Burkholderia cenocepacia J2315 chromosome 1, complete sequenceLysR family regulatory protein2e-0756.2
NC_013592:3397304:341194634119463412842897Dickeya dadantii Ech586, complete genometranscriptional regulator, LysR family2e-0756.2
NC_014828:1632000:164093116409311641830900Ethanoligenens harbinense YUAN-3 chromosome, complete genometranscriptional regulator, LysR family4e-0755.8
NC_010501:4311873:431328943132894314200912Pseudomonas putida W619, complete genometranscriptional regulator, LysR family4e-0755.8
NC_008061:428501:445939445939446790852Burkholderia cenocepacia AU 1054 chromosome 2, complete sequencetranscriptional regulator, LysR family4e-0755.8
NC_015458:1692401:170449717044971705399903Pusillimonas sp. T7-7 chromosome, complete genometranscriptional regulator, LysR family4e-0755.8
NC_010515:2358134:237710923771092377960852Burkholderia cenocepacia MC0-3 chromosome 2, complete sequencetranscriptional regulator, LysR family4e-0755.8
NC_002678:6061448:607659160765916077493903Mesorhizobium loti MAFF303099, complete genometranscriptional regulator4e-0755.8
NC_010125:2813653:282347628234762824366891Gluconacetobacter diazotrophicus PAl 5, complete genomeputative transcriptional regulator, LysR family5e-0755.5
NC_009698:3706154:370735837073583708263906Clostridium botulinum A str. Hall chromosome, complete genomeLysR family transcriptional regulator5e-0755.5
NC_009697:3809044:381024838102483811153906Clostridium botulinum A str. ATCC 19397 chromosome, completeLysR family transcriptional regulator5e-0755.5
NC_009495:3832500:383371438337143834619906Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeLysR family transcriptional regulator5e-0755.5
NC_010516:3903867:390507139050713905976906Clostridium botulinum B1 str. Okra, complete genometranscriptional regulator, LysR family5e-0755.5
NC_012563:4101000:410223141022314103136906Clostridium botulinum A2 str. Kyoto, complete genometranscriptional regulator, LysR family5e-0755.5
NC_013716:1298932:130178713017871302725939Citrobacter rodentium ICC168, complete genomeLysR-family transcriptional regulator5e-0755.5
NC_015759:760671:760671760671761561891Weissella koreensis KACC 15510 chromosome, complete genomehth-type transcriptional regulator alsr (als operon regulatoryprotein)5e-0755.5
NC_015276:855150:859769859769860695927Marinomonas mediterranea MMB-1 chromosome, complete genometranscriptional regulator, LysR family5e-0755.5
NC_007908:1108494:116093711609371161899963Rhodoferax ferrireducens T118, complete genometranscriptional regulator, LysR family5e-0755.5
NC_018681:7692560:769446976944697695374906Nocardia brasiliensis ATCC 700358 chromosome, complete genomeLysR family transcriptional regulator5e-0755.5
NC_009831:1539159:155629415562941557100807Shewanella sediminis HAW-EB3, complete genomeTranscriptional regulator-like protein5e-0755.5
NC_014206:2807879:281221428122142813128915Geobacillus sp. C56-T3 chromosome, complete genomeLysR family transcriptional regulator4e-0755.5
NC_015379:4282815:428503442850344285888855Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative Transcription factor, LysR family4e-0755.5
NC_005835:1773482:177348217734821774435954Thermus thermophilus HB27, complete genometranscriptional regulatory protein, lysR family (hydrogen peroxide-inducible genes activator)4e-0755.5
NC_009617:3647500:366363036636303664517888Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeLysR family transcriptional regulator4e-0755.5
NC_007929:1805000:182164318216431822521879Lactobacillus salivarius subsp. salivarius UCC118, complete genomeTranscriptional Regulator, LysR substrate binding4e-0755.5
NC_010520:3938490:393969439396943940599906Clostridium botulinum A3 str. Loch Maree, complete genometranscriptional regulator, LysR family4e-0755.5
NC_014640:6971000:697104369710436971975933Achromobacter xylosoxidans A8 chromosome, complete genometranscriptional regulator5e-0755.5
NC_012658:3923546:392475039247503925655906Clostridium botulinum Ba4 str. 657 chromosome, complete genomeLysR family transcriptional regulator5e-0755.5
NC_015224:3191000:320949632094963210428933Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,LysR family transcriptional regulator5e-0755.5
NC_012668:83641:106939106939107835897Vibrio cholerae MJ-1236 chromosome 1, complete sequencechromosome replication initiation inhibitor protein5e-0755.5
NC_011094:2061000:206856020685602069438879Salmonella enterica subsp. enterica serovar Schwarzengrund strtranscriptional regulator, LysR family protein6e-0755.1
NC_017297:3939328:394053539405353941440906Clostridium botulinum F str. 230613 chromosome, complete genomeLysR family transcriptional regulator6e-0755.1
NC_009699:3940984:394219139421913943096906Clostridium botulinum F str. Langeland chromosome, complete genomeLysR family transcriptional regulator6e-0755.1
NC_015185:485866:506609506609507505897Desulfurobacterium thermolithotrophum DSM 11699 chromosome,transcriptional regulator, LysR family7e-0755.1
NC_010554:1871000:188943718894371890354918Proteus mirabilis HI4320, complete genomeLysR-family transcriptional regulator6e-0755.1
NC_014727:95875:966349663497560927Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,transcriptional regulator6e-0755.1
NC_012724:2202173:220217322021732203075903Burkholderia glumae BGR1 chromosome 1, complete genomePutative transcriptional regulator6e-0755.1
NC_011149:2040396:204687320468732047751879Salmonella enterica subsp. enterica serovar Agona str. SL483,transcriptional regulator, LysR family6e-0755.1
NC_015738:1925997:193618819361881937144957Eggerthella sp. YY7918, complete genomehypothetical protein6e-0755.1
NC_016002:2825017:283463628346362835517882Pseudogulbenkiania sp. NH8B, complete genomeLysR family transcriptional regulator6e-0755.1
NC_008577:1489643:148964314896431490584942Shewanella sp. ANA-3 chromosome 1, complete sequencetranscriptional regulator, LysR family5e-0755.1
NC_020063:3690308:373302537330253733897873Enterobacteriaceae bacterium strain FGI 57, complete genometranscriptional regulator9e-0754.7
NC_016612:2223357:224533122453312246230900Klebsiella oxytoca KCTC 1686 chromosome, complete genometranscriptional activator NhaR8e-0754.7
NC_010159:1861465:188310218831021884031930Yersinia pestis Angola, complete genometranscriptional regulator LrhA8e-0754.7
NC_013517:2815482:282761828276182828487870Sebaldella termitidis ATCC 33386, complete genometranscriptional regulator, LysR family8e-0754.7
NC_015663:2807574:282295328229532823852900Enterobacter aerogenes KCTC 2190 chromosome, complete genomeYbhD7e-0754.7
NC_014972:480355:480355480355481275921Desulfobulbus propionicus DSM 2032 chromosome, complete genomeLysR family transcriptional regulator7e-0754.7
NC_020272:599064:601787601787602647861Bacillus amyloliquefaciens IT-45, complete genomeRuBisCO transcriptional regulator7e-0754.7
NC_009656:3869281:389143538914353892316882Pseudomonas aeruginosa PA7 chromosome, complete genomeputative transcriptional regulator1e-0654.3
NC_010002:2933909:297159029715902972504915Delftia acidovorans SPH-1, complete genometranscriptional regulator, LysR family1e-0654.3
NC_013446:2919005:293742629374262938367942Comamonas testosteroni CNB-2, complete genometranscriptional regulator, LysR family1e-0654.3
NC_010086:1816378:188389218838921884815924Burkholderia multivorans ATCC 17616 chromosome 2, completetranscriptional regulator, LysR family9e-0754.3
NC_010805:575709:590489590489591412924Burkholderia multivorans ATCC 17616 chromosome 2, completeLysR family transcriptional regulator9e-0754.3
NC_009255:1105786:114008611400861141009924Burkholderia vietnamiensis G4 chromosome 2, complete sequenceLysR family transcriptional regulator9e-0754.3
NC_009654:3980289:398028939802893981167879Marinomonas sp. MWYL1, complete genomeLysR family transcriptional regulator2e-0653.9
NC_014910:242845:245815245815246708894Alicycliphilus denitrificans BC chromosome, complete genomelysr substrate-binding protein2e-0653.9
NC_011772:5021404:503822250382225039115894Bacillus cereus G9842, complete genometranscriptional regulator, LysR family1e-0653.9
NC_011206:1792621:179727317972731798184912Acidithiobacillus ferrooxidans ATCC 53993, complete genometranscriptional regulator, LysR family1e-0653.9
NC_011761:1904637:191162719116271912532906Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completeLysR family transcriptional regulator1e-0653.9
NC_014364:3633291:363738036373803638294915Spirochaeta smaragdinae DSM 11293 chromosome, complete genometranscriptional regulator, LysR family1e-0653.9
NC_003888:7561923:756192375619237562825903Streptomyces coelicolor A3(2), complete genomeLysR-family transcriptional regulator1e-0653.9
NC_009832:110239:112502112502113356855Serratia proteamaculans 568, complete genometranscriptional regulator, LysR family1e-0653.9
NC_008819:199760:203273203273204223951Prochlorococcus marinus str. NATL1A, complete genomeputative Rubisco transcriptional regulator1e-0653.9
NC_008322:641197:656469656469657314846Shewanella sp. MR-7, complete genometranscriptional regulator, LysR family1e-0653.9
NC_007335:1474455:147796814779681478918951Prochlorococcus marinus str. NATL2A, complete genomeRuBisCO operon transcriptional regulator2e-0653.5
NC_003295:2787371:279455227945522795496945Ralstonia solanacearum GMI1000, complete genomePROBABLE TRANSCRIPTION REGULATOR PROTEIN2e-0653.5
NC_015172:3095781:309938330993833100258876Syntrophobotulus glycolicus DSM 8271 chromosome, complete genometranscriptional regulator, LysR family2e-0653.5
NC_006371:1743982:174398217439821744926945Photobacterium profundum SS9 chromosome 2, complete sequencehypothetical transcription regulator LysR family2e-0653.5
NC_013223:2337049:233808223380822338996915Desulfohalobium retbaense DSM 5692, complete genometranscriptional regulator, LysR family2e-0653.1
NC_010694:1324250:133909913390991340025927Erwinia tasmaniensis, complete genomeLysR-family transcriptional regulator2e-0653.1
NC_010002:2933909:294678329467832947643861Delftia acidovorans SPH-1, complete genometranscriptional regulator, LysR family2e-0653.1
NC_009648:2465613:249552524955252496424900Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeLysR family transcriptional regulator2e-0653.1
NC_012731:3193880:321793232179323218831900Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeLysR family transcriptional regulator2e-0653.1
NC_016845:3238507:326673232667323267631900Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,LysR family transcriptional regulator2e-0653.1
NC_014829:259707:262669262669263559891Bacillus cellulosilyticus DSM 2522 chromosome, complete genometranscriptional regulator, LysR family2e-0653.1
NC_011992:3752867:375996937599693760883915Acidovorax ebreus TPSY, complete genometranscriptional regulator, LysR family2e-0653.1
NC_020291:4033000:405339540533954054342948Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genometranscriptional regulator, LysR family2e-0653.1
NC_002488:1638946:164242216424221642814393Xylella fastidiosa 9a5c, complete genomehypothetical protein2e-0653.1
NC_013740:1081454:108873410887341089603870Acidaminococcus fermentans DSM 20731, complete genometranscriptional regulator, LysR family3e-0652.8
NC_014328:3066628:306787930678793068769891Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative LysR family transcriptional regulator3e-0652.8
NC_014838:589581:603140603140604000861Pantoea sp. At-9b plasmid pPAT9B01, complete sequencetranscriptional regulator, LysR family3e-0652.8
NC_003155:921494:921494921494922408915Streptomyces avermitilis MA-4680, complete genomeLysR-family transcriptional regulator3e-0652.8
NC_015601:1463500:147507214750721475968897Erysipelothrix rhusiopathiae str. Fujisawa, complete genomeLysR family transcriptional regulator3e-0652.8
NC_012660:2143376:219460421946042195566963Pseudomonas fluorescens SBW25 chromosome, complete genomeputative LysR family regulatory protein3e-0652.8
NC_003143:2849377:287102128710212871953933Yersinia pestis CO92, complete genomeLysR-family transcriptional regulatory protein4e-0652.4
NC_006155:3040769:306248730624873063419933Yersinia pseudotuberculosis IP 32953, complete genomeLysR-family transcriptional regulatory protein4e-0652.4
NC_008149:2411161:243283524328352433767933Yersinia pestis Nepal516, complete genomeLysR-family transcriptional regulatory protein4e-0652.4
NC_017265:1521276:152127615212761522208933Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,LysR-family transcriptional regulatory protein4e-0652.4
NC_015566:3417951:345404234540423454941900Serratia sp. AS12 chromosome, complete genomeLysR family transcriptional regulator6e-0652
NC_013592:3397304:340137534013753402277903Dickeya dadantii Ech586, complete genometranscriptional regulator, LysR family6e-0652
NC_016642:2440070:246330224633022464228927Pseudovibrio sp. FO-BEG1 chromosome, complete genometranscriptional regulator, LysR family protein6e-0652
NC_008700:312099:315340315340316263924Shewanella amazonensis SB2B, complete genometranscriptional regulator, LysR family5e-0652
NC_002506:822401:829467829467830411945Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completeD-serine deaminase activator5e-0652
NC_009456:383819:394707394707395651945Vibrio cholerae O395 chromosome 1, complete sequenceDNA-binding transcriptional regulator DsdC5e-0652
NC_012580:796387:803453803453804397945Vibrio cholerae M66-2 chromosome II, complete sequenceDNA-binding transcriptional regulator DsdC5e-0652
NC_012583:861225:868291868291869235945Vibrio cholerae O395 chromosome chromosome II, complete sequenceD-serine deaminase activator5e-0652
NC_012667:504534:515421515421516365945Vibrio cholerae MJ-1236 chromosome 2, complete genomeDNA-binding transcriptional regulator DsdC5e-0652
NC_016446:522936:529999529999530943945Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completeDNA-binding transcriptional regulator DsdC5e-0652
NC_016945:822229:829292829292830236945Vibrio cholerae IEC224 chromosome II, complete sequenceDNA-binding transcriptional regulator DsdC5e-0652
NC_012856:1080000:108902310890231089931909Ralstonia pickettii 12D chromosome 1, complete genometranscriptional regulator, LysR family5e-0652
NC_000918:707801:719732719732720652921Aquifex aeolicus VF5, complete genometranscriptional regulator (LysR family)8e-0651.6
NC_007086:1224867:123584212358421236726885Xanthomonas campestris pv. campestris str. 8004, complete genomeregulatory protein bphR7e-0651.6
NC_003902:3666544:372279437227943723678885Xanthomonas campestris pv. campestris str. ATCC 33913, completeregulatory protein bphR7e-0651.6
NC_015381:2859000:288410328841032885047945Burkholderia gladioli BSR3 chromosome 1, complete sequenceLysR family transcriptional regulator7e-0651.6
NC_014966:1668822:167179616717961672716921Vibrio vulnificus MO6-24/O chromosome II, complete sequenceLysR family transcripitonal regulator9e-0651.2
NC_013173:3132517:313725831372583138175918Desulfomicrobium baculatum DSM 4028, complete genometranscriptional regulator, LysR family9e-0651.2