Pre_GI Gene

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Host: NC_010498 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010498:3023442 Escherichia coli SMS-3-5, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli SMS-3-5 was isolated from a toxic-metal contaminated site, Shipyard Creek, Charleston, South Carolina, USA. This strain is highly resistant to a number of antibiotics. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
302344230245421101hypothetical proteinBLASTP
30245353024930396hypothetical proteinBLASTP
30249493025866918glycine cleavage system transcriptional activatorQuickGO ontologyBLASTP
30262183026445228putative lipoproteinQuickGO ontologyBLASTP
302663730278421206cysteine desulfurase catalytic subunit CsdAQuickGO ontologyBLASTP
30278423028285444cysteine desulfurase sulfur acceptor subunit CsdEQuickGO ontologyBLASTP
30283363029136801ThiF family proteinQuickGO ontologyBLASTP
302921930302861068membrane-bound lytic murein transglycosylase AQuickGO ontologyBLASTP
3030525303060177tRNA-MetQuickGO ontology
3030635303071177tRNA-MetQuickGO ontology
3030746303082277tRNA-MetQuickGO ontology
30309013031848948D-isomer specific 2-hydroxyacid dehydrogenase family proteinQuickGO ontologyBLASTP
30319203032516597KpsFGutQ family sugar isomeraseQuickGO ontologyBLASTP
303251930336941176aminotransferase classes I and IIQuickGO ontologyBLASTP
303369430352741581PTS system maltose and glucose-specific IIBC component family proteinQuickGO ontologyBLASTP
30353063036130825putative transcriptional antiterminatorQuickGO ontologyBLASTP
30362263036378153hypothetical proteinBLASTP
303638830376411254N-acetylmuramoyl-L-alanine amidase AmiCQuickGO ontologyBLASTP
303787330392041332amino-acid N-acetyltransferaseQuickGO ontologyBLASTP
303926630410921827exodeoxyribonuclease V alpha subunitQuickGO ontologyBLASTP
304109230446043513exodeoxyribonuclease V beta subunitQuickGO ontologyBLASTP
304462730475152889protease IIIQuickGO ontologyBLASTP