Pre_GI Gene

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Host: NC_011094 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011094:4361238 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
43612384361951714acid phosphatasephosphotransferaseQuickGO ontologyBLASTP
43620804362496417hypothetical proteinBLASTP
43624994362855357hypothetical proteinBLASTP
43628564363194339hypothetical proteinBLASTP
43631814363624444hypothetical proteinBLASTP
436376843665932826excinuclease ABC subunit AQuickGO ontologyBLASTP
43668414367371531single-stranded DNA-binding proteinQuickGO ontologyBLASTP
43675194367644126hypothetical proteinBLASTP
43677624367902141hypothetical proteinBLASTP
43684114369043633hypothetical proteinBLASTP
436904043704281389integral membrane proteinQuickGO ontologyBLASTP
43708114371737927ABC transporter outer membrane proteinQuickGO ontologyBLASTP
4373028438971316686hypothetical proteinBLASTP
438975343918192067type-1 secretion proteinQuickGO ontologyBLASTP
439294143945421602cyclic diguanylate phosphodiesterase EAL domain-containing proteinQuickGO ontologyBLASTP
43945304394853324DNA-binding transcriptional regulator SoxSQuickGO ontologyBLASTP
43949404395398459redox-sensitive transcriptional activator SoxRQuickGO ontologyBLASTP
43956914396359669glutathione S-transferase N- domainQuickGO ontologyBLASTP
43963404396561222hypothetical proteinBLASTP
439670743980561350inorganic anion transporter sulfate permease SulP family proteinQuickGO ontologyBLASTP
43980494398207159hypothetical protein
439820643998521647NaH antiporterQuickGO ontologyBLASTP
43999474400834888LysR family regulatory proteinQuickGO ontologyBLASTP
44008334401348516LrgA family proteinQuickGO ontologyBLASTP
44013414402030690LrgB family proteinQuickGO ontologyBLASTP
440206944037181650acetate permeaseQuickGO ontologyBLASTP
44037154404029315hypothetical proteinBLASTP
440426944062271959acetyl-CoA synthetaseQuickGO ontologyBLASTP