Pre_GI Gene

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Host: NC_006512 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_006512:2211654 Idiomarina loihiensis L2TR, complete genome

Host Lineage: Idiomarina loihiensis; Idiomarina; Idiomarinaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This is the type strain for this organism, which was isolated from a hydrothermal vent at a depth of 1300 m from the Lo'ihi Seamount southeast of Hawaii. This organism grows optimally in salt concentrations of 7.5 to 10%. Genome comparison has suggested that the bacterium has maintained its amino acid transport and degradation systems but lost sugar transport and certain sugar metabolic genes suggesting that it lives on amino acids rather than sugars. This may be in keeping with the environment this organism grows in, which is at hydrothermal deep sea vents that are characterized by collections of proteinaceous particles. This organism may colonize these particles by producing exopolysaccharides.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
22116542212292639Catabolite gene activator proteinQuickGO ontologyBLASTP
22123862213012627NitroreductaseQuickGO ontologyBLASTP
22130092213461453hypothetical proteinBLASTP
22134582214201744Protein containing acetyltransferase GNAT family domainQuickGO ontology
22142492214464216hypothetical protein
22144732214712240Alpha-hemolysin family proteinQuickGO ontologyBLASTP
22147222215105384Predicted membrane proteinQuickGO ontology
221511322164381326Uncharacterized conserved protein HipAQuickGO ontologyBLASTP
22164352216755321Predicted transcriptional regulator HTH-typeQuickGO ontologyBLASTP
22169952217237243Alpha-hemolysin family proteinQuickGO ontology
22173252217885561hypothetical protein
221794122189901050hypothetical proteinBLASTP
22193762220215840Predicted hydrolase of the alphabeta superfamilyQuickGO ontologyBLASTP
222044522230362592Predicted ATPase possibly involved in inorganic ion transportQuickGO ontologyBLASTP
22235922224167576Predicted membrane proteinQuickGO ontology
22242412225191951Predicted membrane proteinQuickGO ontology
222539722282852889glycine dehydrogenaseQuickGO ontologyBLASTP
22284112228800390glycine cleavage system protein HQuickGO ontologyBLASTP
222885122299301080aminomethyltransferaseQuickGO ontologyBLASTP
22300722230914843Transcriptional regulator LysR familyQuickGO ontologyBLASTP
223108922322671179FAD-binding oxidoreductase UbiHCoq6 familyQuickGO ontologyBLASTP
2232264223343011672-polyprenyl-6-methoxyphenol hydroxylaseQuickGO ontologyBLASTP
223341222347341323Xaa-Pro aminopeptidaseQuickGO ontologyBLASTP
22347592235325567hypothetical proteinBLASTP
22354592235770312hypothetical proteinBLASTP
223599422375651572Amidohydrolase family enzymeQuickGO ontologyBLASTP
223761622382035885-formyltetrahydrofolate cyclo-ligase family proteinQuickGO ontologyBLASTP