Pre_GI: BLASTP Hits

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Query: NC_006512:2211654:2211654 Idiomarina loihiensis L2TR, complete genome

Start: 2211654, End: 2212292, Length: 639

Host Lineage: Idiomarina loihiensis; Idiomarina; Idiomarinaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This is the type strain for this organism, which was isolated from a hydrothermal vent at a depth of 1300 m from the Lo'ihi Seamount southeast of Hawaii. This organism grows optimally in salt concentrations of 7.5 to 10%. Genome comparison has suggested that the bacterium has maintained its amino acid transport and degradation systems but lost sugar transport and certain sugar metabolic genes suggesting that it lives on amino acids rather than sugars. This may be in keeping with the environment this organism grows in, which is at hydrothermal deep sea vents that are characterized by collections of proteinaceous particles. This organism may colonize these particles by producing exopolysaccharides.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015638:2588954:261081226108122611411600Lacinutrix sp. 5H-3-7-4 chromosome, complete genomeputative Crp/Fnr family transcriptional regulator2e-1685.9
NC_008255:2839147:285590428559042856470567Cytophaga hutchinsonii ATCC 33406, complete genomecyclic nucleotide binding regulatory protein4e-1581.3
NC_014655:2747399:274739927473992748025627Leadbetterella byssophila DSM 17132 chromosome, complete genometranscriptional regulator, crp/fnr family9e-1580.1
NC_015703:4417342:442170944217094422290582Runella slithyformis DSM 19594 chromosome, complete genomeputative Crp/Fnr family transcriptional regulator2e-1479
NC_017030:8599515:860775686077568608346591Corallococcus coralloides DSM 2259 chromosome, complete genomecyclic nucleotide-binding domain-containing protein5e-1477.8
NC_015846:531984:536755536755537324570Capnocytophaga canimorsus Cc5 chromosome, complete genomeAnaerobic regulatory protein6e-1477.4
NC_015277:5211779:523164152316415232249609Sphingobacterium sp. 21 chromosome, complete genomecyclic nucleotide-binding protein2e-1375.5
NC_015703:4417342:442024444202444420858615Runella slithyformis DSM 19594 chromosome, complete genomecyclic nucleotide-binding protein1e-1273.2
NC_015914:111382:112859112859113494636Cyclobacterium marinum DSM 745 chromosome, complete genomeputative Crp/Fnr family transcriptional regulator2e-1272
NC_008255:3285561:328870532887053289313609Cytophaga hutchinsonii ATCC 33406, complete genomecyclic nucleotide binding regulatory protein3e-1271.6
NC_015759:726612:733489733489734034546Weissella koreensis KACC 15510 chromosome, complete genomeCrp/Fnr family transcriptional regulator6e-1270.9
NC_014655:424486:446462446462447043582Leadbetterella byssophila DSM 17132 chromosome, complete genometranscriptional regulator, crp/fnr family8e-1270.5
NC_020054:2801371:281191428119142812489576Fibrella aestuarina BUZ 2 drat genomeputative transcriptional regulator, Crp/Fnr family9e-1270.5
NC_014655:851381:856804856804857370567Leadbetterella byssophila DSM 17132 chromosome, complete genometranscriptional regulator, crp/fnr family2e-1169.3
NC_013132:1652477:165355716535571654183627Chitinophaga pinensis DSM 2588, complete genomeputative transcriptional regulator, Crp/Fnr family5e-1167.8
NC_020156:3157899:316329731632973163884588Nonlabens dokdonensis DSW-6, complete genomecyclic nucleotide-binding protein1e-1066.6
NC_013222:1659619:168620916862091686811603Robiginitalea biformata HTCC2501, complete genomehypothetical protein3e-1065.1
NC_015703:5865921:589198158919815892556576Runella slithyformis DSM 19594 chromosome, complete genomeputative Crp/Fnr family transcriptional regulator5e-1064.7
NC_019904:5130458:513368051336805134252573Echinicola vietnamensis DSM 17526 chromosome, complete genomecAMP-binding protein7e-1063.9
NC_016609:6022778:603021960302196030839621Niastella koreensis GR20-10 chromosome, complete genomeCrp family transcriptional regulator8e-1063.9
NC_009848:3631243:363651236365123637057546Bacillus pumilus SAFR-032, complete genomehypothetical protein9e-1063.5
NC_019960:659756:669382669382669963582Prevotella dentalis DSM 3688 chromosome 1, complete sequencecAMP-binding protein9e-1063.5
NC_013222:1659619:166941116694111670151741Robiginitalea biformata HTCC2501, complete genomehypothetical protein2e-0962.8
NC_016609:701500:724206724206724781576Niastella koreensis GR20-10 chromosome, complete genomeCrp family transcriptional regulator2e-0962.8
NC_019904:3216416:322252432225243223117594Echinicola vietnamensis DSM 17526 chromosome, complete genomecAMP-binding protein2e-0962.4
NC_013132:7204082:720760572076057208219615Chitinophaga pinensis DSM 2588, complete genomeputative transcriptional regulator, Crp/Fnr family3e-0962
NC_014933:1759729:176600117660011766564564Bacteroides helcogenes P 36-108 chromosome, complete genometranscriptional regulator, Crp/Fnr family6e-0960.8
NC_015177:2795487:279878627987862799361576Pedobacter saltans DSM 12145 chromosome, complete genomeputative transcriptional regulator, Crp/Fnr family1e-0860.1
NC_013132:327743:348378348378348947570Chitinophaga pinensis DSM 2588, complete genomeputative transcriptional regulator, Crp/Fnr family1e-0860.1
NC_016609:1774259:179362917936291794213585Niastella koreensis GR20-10 chromosome, complete genomeCrp family transcriptional regulator1e-0859.7
NC_014655:851381:866054866054866629576Leadbetterella byssophila DSM 17132 chromosome, complete genometranscriptional regulator, crp/fnr family4e-0858.2
NC_004663:2935060:295246329524632953026564Bacteroides thetaiotaomicron VPI-5482, complete genomehypothetical protein6e-0857.4
NC_013730:6933754:695249369524936953077585Spirosoma linguale DSM 74, complete genomeputative transcriptional regulator, Crp/Fnr family6e-0857.4
NC_015711:237526:245848245848246483636Myxococcus fulvus HW-1 chromosome, complete genomeputative Crp/Fnr family transcriptional regulator8e-0857
NC_016609:5986500:600094860009486001517570Niastella koreensis GR20-10 chromosome, complete genomeCrp family transcriptional regulator1e-0757
NC_014655:2705482:272385027238502724383534Leadbetterella byssophila DSM 17132 chromosome, complete genomehypothetical protein1e-0756.6
NC_013730:1948484:196760719676071968188582Spirosoma linguale DSM 74, complete genomeputative transcriptional regulator, Crp/Fnr family1e-0653.1
NC_009615:1601170:160263516026351603192558Parabacteroides distasonis ATCC 8503 chromosome, complete genomecAMP-binding domain-containing protein2e-0652.4
NC_008321:3189974:320712632071263207734609Shewanella sp. MR-4, complete genomecyclic nucleotide-binding protein3e-0652
NC_017030:3546837:355792235579223558527606Corallococcus coralloides DSM 2259 chromosome, complete genomeCrp/Fnr family transcriptional regulator3e-0652
NC_013730:4573077:458017845801784580771594Spirosoma linguale DSM 74, complete genomeputative transcriptional regulator, Crp/Fnr family6e-0650.8