Pre_GI Gene

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Host: NC_012811 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012811:1105395 Methylobacterium extorquens AM1 megaplasmid, complete sequence

Host Lineage: Methylobacterium extorquens; Methylobacterium; Methylobacteriaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: First isolated in 1960 in Oxford, England, as an airborne contaminant growing on methylamine. This strain can grow on methylamine or methanol, but not methane. This organism is capable of growth on one-carbon compounds such as methanol. Methanol is oxidized to formaldehyde which is then used metabolically to generate either energy or biomass. These bacteria are commonly found in the environment, especially associated with plants which produce methanol when metabolizing pectin during cell wall synthesis. At least 25 genes are required for this complex process of converting methanol to formaldehyde and this specialized metabolic pathway is of great interest.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
110014011053985259DEADDEAH box helicase domain proteinQuickGO ontologyBLASTP
110539511081542760Helicase domain proteinQuickGO ontologyBLASTP
110815411121433990putative type II DNA modification enzymeQuickGO ontologyBLASTP
11121401112946807putative restriction endonucleaseQuickGO ontologyBLASTP
111790011190931194hypothetical proteinBLASTP
11195971119851255hypothetical proteinBLASTP
11198541120159306hypothetical protein
11206811120947267hypothetical protein
11250001125995996hypothetical proteinBLASTP
112602111270371017NADPH quinone oxidoreductase Zinc-containing alcohol dehydrogenase superfamilyQuickGO ontologyBLASTP
11271521127469318hypothetical proteinBLASTP
11275411128443903Transcriptional regulator LysR familyQuickGO ontologyBLASTP
11285091129255747hypothetical proteinBLASTP