Pre_GI Gene

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Host: NC_006814 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_006814:51500 Lactobacillus acidophilus NCFM, complete genome

Host Lineage: Lactobacillus acidophilus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: This organism is a normal inhabitant of the human intestinal tract. This strain was isolated from a human in 1970. Normal gastrointestinal bacterium. They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. This organism has been studied for its ability to help the human gut maintain its natural microbial community. Strains of this organism are also used in the production of yogurt, cheese and other fermented foods.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
5168752523837exodeoxyribonuclease AQuickGO ontologyBLASTP
52568540251458glutamategamma-aminobutyrate antiporterQuickGO ontologyBLASTP
54071569202850putative phage DEAD box family helicaseQuickGO ontologyBLASTP
56949580871139penicillin-binding proteinQuickGO ontology
5824858674427peptide deformylaseQuickGO ontology
5925560826157216S ribosomal RNAQuickGO ontologyBLASTP
6095764007305123S ribosomal RNAQuickGO ontologyBLASTP
63998641141175S ribosomal RNAQuickGO ontologyBLASTP
641276419973tRNA-AsnQuickGO ontology
6528365641359hypothetical protein
6566865790123putative fumarate reductase flavoprotein subunitQuickGO ontologyBLASTP
65956671461191fumarate reductase flavoprotein subunitQuickGO ontologyBLASTP
6717667829654transcriptional regulatorQuickGO ontologyBLASTP
6797868223246putative steroid binding proteinQuickGO ontologyBLASTP
6830469173870phospho-beta-glycosidaseQuickGO ontologyBLASTP
6917070126957putative glycosyl transferaseQuickGO ontologyBLASTP
7013071099970putative glucosyl transferaseQuickGO ontology
7111671959844glycosyl transferaseQuickGO ontology
721867227893hypothetical protein
7259673367772hypothetical protein
7347773941465hypothetical proteinBLASTP
74379759711593ABC transporter bacteriocinQuickGO ontologyBLASTP
75973775651593ABC transporter bacteriocinQuickGO ontologyBLASTP
77542792621721transposaseQuickGO ontology