Pre_GI Gene

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Host: NC_010501 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010501:4311873 Pseudomonas putida W619, complete genome

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas putida is a common endophytic and rhizosphere bacterium. Pseudomonas putida W619 was isolated from the Black Cottonwood tree and is closely related to other endophytic and rhizosphere strains of Pseudomonas putida. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
431187343131591287major facilitator superfamily MFS_1QuickGO ontologyBLASTP
43132894314200912transcriptional regulator LysR familyQuickGO ontologyBLASTP
43145264315137612hypothetical proteinBLASTP
431514343193034161YD repeat proteinQuickGO ontologyBLASTP
43200424320506465hypothetical proteinBLASTP
43218074322502696RHS proteinQuickGO ontologyBLASTP
43225074322980474hypothetical proteinBLASTP
43233614323723363hypothetical proteinBLASTP
43236774324198522hypothetical proteinBLASTP
43242084324981774glutamine amidotransferase class-IIQuickGO ontologyBLASTP
43249964325490495hypothetical protein
432557343276152043Oligopeptidase BQuickGO ontologyBLASTP
43277294328196468cyclic nucleotide-binding proteinQuickGO ontologyBLASTP
43281934328471279hypothetical protein
43286034328974372HNH endonucleaseQuickGO ontologyBLASTP
43291154329516402tRNArRNA methyltransferase SpoUQuickGO ontologyBLASTP
43296324329973342hypothetical proteinBLASTP
433002043312281209hypothetical protein
43312704331758489protein of unknown function UPF0153QuickGO ontologyBLASTP
43319064332838933D-isomer specific 2-hydroxyacid dehydrogenase NAD-bindingQuickGO ontologyBLASTP
43329174333210294protein of unknown function DUF709QuickGO ontologyBLASTP
433320743343401134ribonuclease DQuickGO ontologyBLASTP