Pre_GI Gene

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Host: NC_006905 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_006905:4405301 Salmonella enterica subsp. enterica serovar Choleraesuis str

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a 58-year old man with sepsis and has been shown to be resistant to ciprofloxacin and ceftriaxone. This organism also causes severe disease (swine paratyphoid) in pigs. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
44053014406014714non-specific acid phosphatasephosphotransferase class BQuickGO ontologyBLASTP
44061434406559417putative cytoplasmic proteinQuickGO ontologyBLASTP
44065624406918357putative cytoplasmic proteinQuickGO ontologyBLASTP
44069194407257339putative inner membrane proteinQuickGO ontologyBLASTP
44072444407699456putative outer membrane lipoproteinQuickGO ontologyBLASTP
440783144106562826excinuclease ABC subunit AQuickGO ontologyBLASTP
44109044411434531single-strand DNA-binding proteinQuickGO ontologyBLASTP
44119024412066165hypothetical proteinBLASTP
44124744413106633putative inner membrane or exportedQuickGO ontologyBLASTP
441310344144911389putative methyl-accepting chemotaxis proteinQuickGO ontologyBLASTP
441448144158001320putative ABC exporter outer membrane component homologQuickGO ontologyBLASTP
441579744170741278membrane permease predicted cation efflux pumpQuickGO ontologyBLASTP
4417091443377016680putative inner membrane proteinQuickGO ontologyBLASTP
443381044358762067putative ABC-type bacteriocinlantibiotic exporter contain an N-terminal double-glycine peptidase domainQuickGO ontologyBLASTP
44361544436525372putative inner membrane proteinQuickGO ontologyBLASTP
443697744385991623putative diguanylate cyclasephosphodiesteraseQuickGO ontologyBLASTP
44385874438910324transcriptional activator of superoxide response regulon AraCXylS familyQuickGO ontologyBLASTP
44389974439455459redox-sensing transcriptional activator SoxR contains iron-sulfur center for redox-sensing MerR familyQuickGO ontologyBLASTP
44397484440416669putative glutathione S-transferaseQuickGO ontologyBLASTP
444076344421121350putative xanthineuracil permease familyQuickGO ontologyBLASTP
444221744439081692putative CPA1 family NaH transport proteinQuickGO ontologyBLASTP
44440034444890888putative transcriptional regulator LysR familyQuickGO ontologyBLASTP
44449944445404411putative inner membrane proteinQuickGO ontologyBLASTP
44453974446086690putative inner membrane proteinQuickGO ontologyBLASTP