Pre_GI Gene

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Host: NC_009654 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009654:3980289 Marinomonas sp. MWYL1, complete genome

Host Lineage: Marinomonas; Marinomonas; Oceanospirillaceae; Oceanospirillales; Proteobacteria; Bacteria

General Information: Marinomonas MWYL1 was isolated from the root surface of the salt marsh grass Spartina anglica, growing near the North Norfolk, England village of Stiffkey. The genus Marinomonas comprises a widespread group of g -proteobacteria that exist in coastal waters, and which had been earlier been included in the genus Alteromonas. The interest in Marinomonas MWYL 1 was that it could grow on the betaine molecule Dimethylsulphoniopropionate (DMSP) as sole carbon source and, when it did do, it released large amounts of the gas dimethyl sulphide. DMSP is a compatible solute that is used by many marine phytoplankton and seaweed macroalgae as an osmoticum and an anti-stress compound. In addition, a few known land angiosperms make DMSP and these include certain species of Spartina - hence the choice of these plants as a source for DMSP-degrading bacteria. Indeed, others had shown previously that the DMSP-catabolising bacteria isolated from Spartina root surfaces included Marinomonas strains.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
39802893981167879LysR family transcriptional regulatorQuickGO ontologyBLASTP
39812543982090837UTP-glucose-1-phosphate uridylyltransferaseQuickGO ontologyBLASTP
39821973983165969monosaccharide-transporting ATPaseQuickGO ontologyBLASTP
398316239842201059monosaccharide-transporting ATPaseQuickGO ontologyBLASTP
398428339858541572ABC transporter relatedQuickGO ontologyBLASTP
39859393986925987periplasmic binding proteinLacI transcriptional regulatorQuickGO ontologyBLASTP
39871663988113948auxin efflux carrierQuickGO ontologyBLASTP
39882673989187921LysR family transcriptional regulatorQuickGO ontologyBLASTP
39893213990019699pirin domain-containing proteinQuickGO ontologyBLASTP
39901393990945807FAD-binding 9 siderophore-interacting domain-containing proteinQuickGO ontologyBLASTP
39980793998369291CRISPR-associated Cas2 family proteinQuickGO ontologyBLASTP
39983723999295924CRISPR-associated Cas1 family proteinQuickGO ontologyBLASTP
39992954000119825hypothetical proteinBLASTP