Pre_GI: BLASTP Hits

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Query: NC_009381:1362471:1397299 Yersinia pestis Pestoides F chromosome, complete genome

Start: 1397299, End: 1397484, Length: 186

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Atypical strain isolated from the former Soviet Union, USSR. This strain lacks a plasminogen activator and is virulent by the aerosol route. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_005810:1794490:179545917954591795740282Yersinia pestis biovar Microtus str. 91001, complete genomeputative transcriptional regulator6e-29125
NC_008150:1420825:142179414217941422075282Yersinia pestis Antiqua, complete genomehypothetical protein6e-29125
NC_003143:2137945:213871521387152138996282Yersinia pestis CO92, complete genomeputative transcriptional regulator6e-29125
NC_012731:3411161:342822134282213428406186Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeputative transcriptional regulator7e-29125
NC_010634:1916000:191718019171801917365186Yersinia pseudotuberculosis PB1/+, complete genomephage transcriptional regulator, AlpA7e-29125
NC_004547:1873390:188101818810181881212195Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative prophage regulatory protein4e-25113
NC_011283:1811000:185314418531441853353210Klebsiella pneumoniae 342 chromosome, complete genometranscriptional regulator AlpA family1e-24112
NC_013421:1819036:184166718416671841861195Pectobacterium wasabiae WPP163, complete genomephage transcriptional regulator, AlpA3e-24110
NC_014500:3097362:314293231429323143126195Dickeya dadantii 3937 chromosome, complete genomeDNA-binding protein2e-24110
NC_012912:1701231:171525317152531715447195Dickeya zeae Ech1591, complete genomephage transcriptional regulator, AlpA2e-24110
NC_017047:2079368:208454920845492084743195Rahnella aquatilis HX2 chromosome, complete genomeputative prophage regulatory protein7e-24108
NC_013592:2968500:299374929937492993943195Dickeya dadantii Ech586, complete genomephage transcriptional regulator, AlpA8e-24108
NC_016818:1795576:183513518351351835329195Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeputative transcriptional regulator5e-23106
NC_009792:4017510:402541840254184025576159Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein4e-1476.6
NC_015379:2417312:246348524634852463706222Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative transcription factor, AlpA family3e-1167.4
NC_015224:3291736:331240633124063312600195Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,phage transcriptional regulator, AlpA4e-1167
NC_017033:2081206:210752221075222107743222Frateuria aurantia DSM 6220 chromosome, complete genomeputative transcriptional regulator6e-1166.2
NC_012560:1677798:168635916863591686646288Azotobacter vinelandii DJ, complete genomeProphage CP4-57 regulatory, AlpA-like protein8e-1165.9
NC_021150:1677811:168637216863721686659288Azotobacter vinelandii CA6, complete genomeProphage CP4-57 regulatory, AlpA-like protein8e-1165.9
NC_008322:2077628:209572820957282095949222Shewanella sp. MR-7, complete genomephage transcriptional regulator, AlpA1e-1065.1
NC_008150:650899:655055655055655255201Yersinia pestis Antiqua, complete genometranscriptional regulator3e-1063.9
NC_005810:1130251:114441011444101144610201Yersinia pestis biovar Microtus str. 91001, complete genometranscriptional regulator3e-1063.9
NC_010159:1417993:142247114224711422671201Yersinia pestis Angola, complete genometranscriptional regulator, AlpA family3e-1063.9
NC_008149:3251196:326535532653553265555201Yersinia pestis Nepal516, complete genometranscriptional regulator3e-1063.9
NC_009381:2939782:295394029539402954140201Yersinia pestis Pestoides F chromosome, complete genometranscriptional regulator3e-1063.9
NC_017168:4155143:416033541603354160535201Yersinia pestis A1122 chromosome, complete genomeAlpA family transcriptional regulator3e-1063.9
NC_017265:1136000:113964911396491139849201Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,DNA-binding protein3e-1063.9
NC_009901:1516340:153082715308271531030204Shewanella pealeana ATCC 700345, complete genomephage transcriptional regulator, AlpA3e-1063.9
NC_010170:1324758:135213513521351352347213Bordetella petrii, complete genomeputative transcriptional regulator (phage-related)3e-1063.9
NC_009439:1297851:130657513065751306763189Pseudomonas mendocina ymp, complete genomephage transcriptional regulator, AlpA4e-1063.5
NC_008344:49039:121606121606121818213Nitrosomonas eutropha C91, complete genomephage transcriptional regulator, AlpA3e-1063.5
NC_005139:2201820:227257322725732272794222Vibrio vulnificus YJ016 chromosome I, complete sequencepredicted transcriptional regulator9e-1062.4
NC_012912:4194821:419819641981964198399204Dickeya zeae Ech1591, complete genomephage transcriptional regulator, AlpA9e-1062.4
NC_013592:4295449:430099243009924301195204Dickeya dadantii Ech586, complete genomephage transcriptional regulator, AlpA9e-1062.4
NC_014500:443874:459413459413459616204Dickeya dadantii 3937 chromosome, complete genomeDNA-binding protein9e-1062.4
NC_016445:1363831:140720214072021407378177Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completetranscriptional regulator9e-1062.4
NC_017270:1755552:177452717745271774703177Vibrio cholerae LMA3984-4 chromosome chromosome I, completetranscriptional regulator9e-1062.4
NC_012880:4117376:412043941204394120642204Dickeya dadantii Ech703, complete genomephage transcriptional regulator, AlpA8e-1062.4
NC_012691:2614603:262271626227162622955240Tolumonas auensis DSM 9187, complete genomephage transcriptional regulator, AlpA8e-1062.4
NC_002505:1931750:193580119358011936007207Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completetranscriptional regulator1e-0962
NC_009457:1444449:148890414889041489110207Vibrio cholerae O395 chromosome 2, complete sequencetranscriptional regulator1e-0962
NC_012578:1838470:188293418829341883140207Vibrio cholerae M66-2 chromosome I, complete sequencetranscriptional regulator1e-0962
NC_012582:2013515:202032320203232020529207Vibrio cholerae O395 chromosome chromosome I, complete sequencetranscriptional regulator1e-0962
NC_012668:1688500:171150017115001711706207Vibrio cholerae MJ-1236 chromosome 1, complete sequencetranscriptional regulator1e-0962
NC_016944:1978058:198210919821091982315207Vibrio cholerae IEC224 chromosome I, complete sequencetranscriptional regulator1e-0962
NC_005139:796546:813042813042813236195Vibrio vulnificus YJ016 chromosome I, complete sequencepredicted transcriptional regulator1e-0961.6
NC_015424:3520783:355680435568043556980177Aeromonas veronii B565 chromosome, complete genomeputative transcriptional regulator1e-0961.6
NC_011745:3245000:326245132624513262654204Escherichia coli ED1a chromosome, complete genomeputative regulatory protein from prophage (AlpA family)1e-0961.6
NC_004578:3849835:386503638650363865278243Pseudomonas syringae pv. tomato str. DC3000, complete genomeDNA-binding protein, putative2e-0960.8
NC_013892:3278647:328257832825783282784207Xenorhabdus bovienii SS-2004 chromosome, complete genomeCP4-57 prophage; transcriptional acitvator of a P4-like cryptic prophage3e-0960.8
NC_009512:3282500:330249833024983302713216Pseudomonas putida F1, complete genomephage transcriptional regulator, AlpA3e-0960.5
NC_014972:247028:265810265810266025216Desulfobulbus propionicus DSM 2032 chromosome, complete genomephage transcriptional regulator, AlpA3e-0960.5
NC_020829:5174354:518228151822815182514234Pseudomonas denitrificans ATCC 13867, complete genomeDNA-binding protein3e-0960.5
NC_014500:3744705:376114837611483761351204Dickeya dadantii 3937 chromosome, complete genomeputative regulatory protein5e-0960.1
NC_015733:2658337:266372826637282663967240Pseudomonas putida S16 chromosome, complete genomephage transcriptional regulator AlpA6e-0959.7
NC_009648:5119271:514087751408775141077201Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein5e-0959.7
NC_012731:600518:627192627192627392201Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein5e-0959.7
NC_016832:948029:957798957798958013216Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein5e-0959.7
NC_015731:1578106:159965415996541599836183Nitrosomonas sp. Is79A3 chromosome, complete genomephage transcriptional regulator AlpA5e-0959.7
NC_015379:908904:935089935089935310222Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Putative transcription factor, AlpA family7e-0959.3
NC_012668:1688500:169464616946461694876231Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein7e-0959.3
NC_007722:2993852:299950229995022999717216Erythrobacter litoralis HTCC2594, complete genomehypothetical protein7e-0959.3
NC_011094:638552:652744652744652941198Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein1e-0858.9
NC_017270:1755552:178876517887651788965201Vibrio cholerae LMA3984-4 chromosome chromosome I, completetranscriptional regulator, AlpA like protein1e-0858.9
NC_010694:2716348:273867627386762738873198Erwinia tasmaniensis, complete genomePutative hypothetical protein (prophage CP4-57 regulatory protein)9e-0958.9
NC_014923:3968000:397587739758773976080204Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeProphage CP4-57 regulatory8e-0958.9
NC_010322:5293652:531510753151075315289183Pseudomonas putida GB-1 chromosome, complete genomephage transcriptional regulator AlpA8e-0958.9
NC_011745:2209288:226533522653352265553219Escherichia coli ED1a chromosome, complete genomeputative DNA binding protein from phage origin1e-0858.5
NC_009138:1974935:198388419838841984096213Herminiimonas arsenicoxydans, complete genomeputative CP4-57 prophage; transcriptional acitvator of a P4-like cryptic prophage1e-0858.5
NC_007086:2477040:248606124860612486282222Xanthomonas campestris pv. campestris str. 8004, complete genomehypothetical protein1e-0858.5
NC_010688:2781624:279949727994972799718222Xanthomonas campestris pv. campestris, complete genomephage-related regulatory protein1e-0858.5
NC_013456:2984491:299468929946892994889201Vibrio sp. Ex25 chromosome 1, complete genomephage transcriptional regulator AlpA1e-0858.5
NC_003295:998000:101150510115051011771267Ralstonia solanacearum GMI1000, complete genomePUTATIVE BACTERIOPHAGE DNA-BINDING TRANSCRIPTION REGULATOR PROTEIN1e-0858.2
NC_016944:514742:530410530410530610201Vibrio cholerae IEC224 chromosome I, complete sequencetranscriptional regulator1e-0858.2
NC_012668:83641:897378973789937201Vibrio cholerae MJ-1236 chromosome 1, complete sequencetranscriptional regulator1e-0858.2
NC_002505:514732:530402530402530602201Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completetranscriptional regulator1e-0858.2
NC_016830:3869572:394020739402073940377171Pseudomonas fluorescens F113 chromosome, complete genometranscriptional regulator in PFGI-1-like cluster2e-0857.8
NC_013716:2139952:216269121626912162930240Citrobacter rodentium ICC168, complete genomehypothetical protein2e-0857.8
NC_007404:2743877:275254427525442752756213Thiobacillus denitrificans ATCC 25259, complete genomePossible Transcriptional Regulator2e-0857.8
NC_009792:3225965:324232932423293242529201Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein2e-0857.4
NC_008253:1938975:196845019684501968668219Escherichia coli 536, complete genomeputative regulatory protein3e-0857.4
NC_020304:752012:772470772470772679210Desulfocapsa sulfexigens DSM 10523, complete genomeputative transcriptional regulator3e-0857.4
NC_008321:1993541:201135520113552011549195Shewanella sp. MR-4, complete genomephage transcriptional regulator, AlpA3e-0857
NC_005085:659378:678312678312678530219Chromobacterium violaceum ATCC 12472, complete genomeprobable prophage regulatory protein3e-0857
NC_008782:1510000:151461215146121514824213Acidovorax sp. JS42, complete genomephage transcriptional regulator, AlpA3e-0857
NC_011094:2791719:281336128133612813570210Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein4e-0857
NC_016002:2037374:204152720415272041703177Pseudogulbenkiania sp. NH8B, complete genomephage transcriptional regulator AlpA8e-0855.8
NC_013892:1272448:129876412987641298970207Xenorhabdus bovienii SS-2004 chromosome, complete genomeCP4-57 prophage; transcriptional acitvator of a P4-like cryptic prophage7e-0855.8
NC_018691:3525430:356425235642523564566315Alcanivorax dieselolei B5 chromosome, complete genomePhage transcriptional regulator, AlpA7e-0855.8
NC_011741:4570498:458052645805264580732207Escherichia coli IAI1 chromosome, complete genomeputative phage DNA binding protein9e-0855.5
CU928160:4570498:458052645805264580732207Escherichia coli IAI1 chromosome, complete genomeputative phage DNA binding protein9e-0855.5
NC_012660:2143376:215198521519852152215231Pseudomonas fluorescens SBW25 chromosome, complete genomeputative phage-like protein1e-0755.5
NC_015675:4565500:457963945796394579836198Mesorhizobium opportunistum WSM2075 chromosome, complete genomephage transcriptional regulator AlpA2e-0754.3
NC_009436:3117661:314615831461583146364207Enterobacter sp. 638, complete genomephage transcriptional regulator, AlpA3e-0753.9
NC_003911:2042389:205289020528902053081192Silicibacter pomeroyi DSS-3, complete genomeDNA-binding protein, putative4e-0753.5
NC_009256:458649:463834463834464040207Burkholderia vietnamiensis G4 chromosome 1, complete sequencephage transcriptional regulator AlpA4e-0753.5
NC_012917:833721:838409838409838669261Pectobacterium carotovorum subsp. carotovorum PC1, complete genomephage transcriptional regulator, AlpA4e-0753.5
NC_008800:1090000:109849810984981098698201Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,hypothetical protein5e-0753.1
NC_017192:2216914:222115122211512221318168Arcobacter sp. L, complete genomehypothetical protein5e-0753.1
NC_010067:191190:199577199577199783207Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein4e-0753.1
NC_010676:2793237:279827727982772798510234Burkholderia phytofirmans PsJN chromosome 2, complete sequencephage transcriptional regulator, AlpA4e-0753.1
NC_011283:4438500:445473644547364454942207Klebsiella pneumoniae 342 chromosome, complete genometranscriptional regulator AlpA family7e-0752.8
NC_010334:4925936:493241549324154932630216Shewanella halifaxensis HAW-EB4, complete genomephage transcriptional regulator, AlpA7e-0752.8
NC_010498:4072681:408781140878114088077267Escherichia coli SMS-3-5, complete genomeAlpA family transcriptional regulator6e-0752.8
NC_010468:1130000:115080511508051151071267Escherichia coli ATCC 8739, complete genomephage transcriptional regulator, AlpA6e-0752.8
NC_007613:4217557:422168542216854221951267Shigella boydii Sb227, complete genomehypothetical protein6e-0752.8
NC_011740:448000:452630452630452896267Escherichia fergusonii ATCC 35469, complete genomeconserved hypothetical protein of bacteriophage origin, putative COG3311, putative DNA binding6e-0752.8
NC_013361:4959323:495991949599194960185267Escherichia coli O26:H11 str. 11368 chromosome, complete genomeDNA binding transcriptional regulator6e-0752.8
NC_010468:49074:496614966149927267Escherichia coli ATCC 8739, complete genomephage transcriptional regulator, AlpA6e-0752.8
NC_020260:603796:634711634711634926216Cronobacter sakazakii Sp291, complete genomephage transcriptional regulator AlpA1e-0652.4
NC_009436:3367194:338079433807943381060267Enterobacter sp. 638, complete genomephage transcriptional regulator, AlpA9e-0752.4
NC_020211:996497:100966210096621009928267Serratia marcescens WW4, complete genomehypothetical protein9e-0752.4
NC_002655:3538656:356603035660303566236207Escherichia coli O157:H7 EDL933, complete genomeputative DNA binding protein8e-0752.4
NC_002695:3468873:349874034987403498946207Escherichia coli O157:H7 str. Sakai, complete genomeputative DNA binding protein8e-0752.4
NC_013008:3525428:355770135577013557907207Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeDNA binding protein8e-0752.4
NC_017986:1862408:187337618733761873591216Pseudomonas putida ND6 chromosome, complete genomephage transcriptional regulator AlpA1e-0652
NC_007925:138927:166679166679166894216Rhodopseudomonas palustris BisB18, complete genomephage transcriptional regulator, AlpA1e-0652
NC_020908:1472981:149682614968261497020195Octadecabacter arcticus 238, complete genomeprophage regulatory protein-like protein1e-0651.6
NC_017506:1100679:111453411145341114761228Marinobacter adhaerens HP15 chromosome, complete genomeprophage CP4-57 regulatory2e-0651.2
NC_011080:4703266:471759947175994717859261Salmonella enterica subsp. enterica serovar Newport str. SL254,phage transcriptional regulator, AlpA2e-0651.2
NC_013941:3300000:333647233364723336720249Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeDNA binding protein2e-0651.2
NC_009092:1441813:145459814545981454783186Shewanella loihica PV-4, complete genomephage transcriptional regulator, AlpA2e-0651.2
NC_011149:1987291:201618320161832016401219Salmonella enterica subsp. enterica serovar Agona str. SL483,hypothetical protein2e-0651.2
NC_011205:2180598:221304722130472213265219Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein2e-0651.2
NC_011274:2044000:207716020771602077378219Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91phage regulatory protein2e-0651.2
NC_011294:2053991:208603220860322086250219Salmonella enterica subsp. enterica serovar Enteritidis strphage regulatory protein2e-0651.2
NC_016831:947281:957204957204957422219Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative phage regulatory protein2e-0651.2
NC_013456:212150:224574224574224762189Vibrio sp. Ex25 chromosome 1, complete genomepredicted transcriptional regulator2e-0651.2
NC_002695:301939:318189318189318449261Escherichia coli O157:H7 str. Sakai, complete genomeputative DNA binding protein3e-0650.8
NC_002655:301940:318190318190318450261Escherichia coli O157:H7 EDL933, complete genomeputative regulatory protein encoded in prophage CP-933I3e-0650.8
NC_011353:305820:322069322069322329261Escherichia coli O157:H7 str. EC4115 chromosome, complete genomephage DNA binding protein3e-0650.8
NC_013008:306953:323381323381323641261Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeregulatory protein encoded in prophage CP-933I3e-0650.8
NC_013941:338121:359163359163359423261Escherichia coli O55:H7 str. CB9615 chromosome, complete genomephage DNA binding protein3e-0650.8
NC_012917:3684840:368998636899863690246261Pectobacterium carotovorum subsp. carotovorum PC1, complete genomephage transcriptional regulator, AlpA3e-0650.8
NC_016857:2871689:289653928965392896805267Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74phage DNA binding protein2e-0650.8
NC_012917:1840172:185006018500601850278219Pectobacterium carotovorum subsp. carotovorum PC1, complete genomephage transcriptional regulator, AlpA2e-0650.8
NC_009720:464078:485378485378485578201Xanthobacter autotrophicus Py2, complete genomephage transcriptional regulator, AlpA4e-0650.4
NC_013421:1819036:184891018489101849116207Pectobacterium wasabiae WPP163, complete genomephage transcriptional regulator, AlpA3e-0650.4
NC_006511:4465495:446677144667714467101331Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC3e-0650.4
NC_015554:4648919:466519546651954665377183Alteromonas sp. SN2 chromosome, complete genomephage transcriptional regulator, AlpA3e-0650.4
NC_013508:3593000:360746636074663607687222Edwardsiella tarda EIB202, complete genomehypothetical protein3e-0650.4
NC_011147:4460726:446200144620014462267267Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein3e-0650.4
NC_010473:2839902:284843128484312848643213Escherichia coli str. K-12 substr. DH10B, complete genomeCP4-57 prophage; DNA-binding transcriptional activator5e-0650.1
NC_009720:251703:276787276787277002216Xanthobacter autotrophicus Py2, complete genomephage transcriptional regulator, AlpA5e-0650.1
NC_000913:2746886:275666627566662756878213Escherichia coli K12, complete genomeCP4-57 prophage; DNA-binding transcriptional activator5e-0650.1
AC_000091:2747520:275730027573002757512213Escherichia coli W3110 DNA, complete genomeDNA-binding transcriptional activator5e-0650.1
NC_012759:2633949:264247826424782642690213Escherichia coli BW2952 chromosome, complete genomeCP4-57 prophage; DNA-binding transcriptional activator5e-0650.1
NC_008435:1131242:116366511636651163880216Rhodopseudomonas palustris BisA53, complete genomephage transcriptional regulator, AlpA5e-0650.1
NC_014121:677799:691347691347691613267Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completephage transcriptional regulator, AlpA4e-0650.1
NC_016631:2051475:205836320583632058578216Granulicella mallensis MP5ACTX8 chromosome, complete genomephage transcriptional regulator, AlpA4e-0650.1
NC_014217:2760898:276247027624702762673204Starkeya novella DSM 506 chromosome, complete genomephage transcriptional regulator, AlpA4e-0650.1
NC_010102:2862178:286427828642782864544267Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein4e-0650.1
NC_011080:2870428:288471228847122884978267Salmonella enterica subsp. enterica serovar Newport str. SL254,phage DNA binding protein4e-0650.1
NC_015675:5607297:563200956320095632224216Mesorhizobium opportunistum WSM2075 chromosome, complete genomephage transcriptional regulator AlpA1e-0548.9