Pre_GI Gene

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Host: NC_009092 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009092:1441813 Shewanella loihica PV-4, complete genome

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
144181314428981086Peptidyl-Lys metalloendopeptidaseQuickGO ontologyBLASTP
14434171443851435OsmC family proteinQuickGO ontologyBLASTP
14439181444859942transcriptional regulator LysR familyQuickGO ontologyBLASTP
14449981445246249hypothetical protein
14452481446180933protein of unknown function DUF897QuickGO ontologyBLASTP
14461901446672483phosphoribosylaminoimidazole carboxylase catalytic subunitQuickGO ontologyBLASTP
144667214477691098phosphoribosylaminoimidazole carboxylase ATPase subunitQuickGO ontologyBLASTP
14482221448908687hypothetical protein
144902414504901467hypothetical proteinBLASTP
14508081451473666transposaseQuickGO ontologyBLASTP
14515631452288726retinol acyltransferase domain proteinQuickGO ontologyBLASTP
14523611452921561phage integrase family proteinQuickGO ontologyBLASTP
14530311453435405hypothetical proteinBLASTP
14535151453877363hypothetical proteinBLASTP
14539531454426474DNA repair protein RadCQuickGO ontologyBLASTP
14545981454783186phage transcriptional regulator AlpAQuickGO ontologyBLASTP
14550681455226159phage transcriptional regulator AlpAQuickGO ontologyBLASTP
145559714577562160DNA methylase N-4N-6 domain proteinQuickGO ontologyBLASTP
145776214603472586type III restriction enzyme res subunitQuickGO ontologyBLASTP
14604881460853366hypothetical proteinBLASTP
14610011461984984hypothetical proteinBLASTP
146198114640172037UvrDREP helicaseQuickGO ontologyBLASTP
14640901464632543hypothetical proteinBLASTP
14646371465020384transcriptional regulator XRE familyQuickGO ontologyBLASTP
146555914667881230phage integrase family proteinQuickGO ontologyBLASTP