Pre_GI Gene

Some Help

Host: NC_010468 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010468:1130000 Escherichia coli ATCC 8739, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
1130155113143512814-aminobutyrate aminotransferaseQuickGO ontologyBLASTP
113144911328971449succinic semialdehyde dehydrogenaseQuickGO ontologyBLASTP
113292011341881269FAD dependent oxidoreductaseQuickGO ontologyBLASTP
11342071135184978Protein of unknown function CsiDQuickGO ontologyBLASTP
113593211377731842alpha amylase catalytic regionQuickGO ontologyBLASTP
1138333113840876tRNA-MetQuickGO ontologyBLASTP
11409601141103144hypothetical proteinBLASTP
114144211460224581outer membrane autotransporter barrel domain proteinQuickGO ontologyBLASTP
114668611490192334phageplasmid primase P4 familyQuickGO ontologyBLASTP
11490341149354321putative protein encoded in prophageQuickGO ontologyBLASTP
11494901149945456hypothetical proteinBLASTP
11499381150225288hypothetical proteinBLASTP
11502181150808591putative bacteriophage proteinQuickGO ontologyBLASTP
11508051151071267phage transcriptional regulator AlpAQuickGO ontologyBLASTP
11516231152357735hypothetical proteinBLASTP
11523541152854501transcriptional activator OgrdeltaQuickGO ontologyBLASTP
11529281153500573polarity suppression proteinQuickGO ontologyBLASTP