Pre_GI Gene

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Host: NC_005139 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_005139:796546 Vibrio vulnificus YJ016 chromosome I, complete sequence

Host Lineage: Vibrio vulnificus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a Biotype 1 hospital isolate from Taiwan. It contains larger chromosomes and >1000 genes as compared to Vibrio cholerae and contains a conjugative plasmid, pYJ016. There are numerous virulence factors including a cytolysin, protease, capsular polysaccharide as well as iron-uptake systems encoded in the genome. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Organisms of this species are opportunistic pathogens that can attack immunocompromised patients and causes gastroenteritis (inflammation of mucous membranes of stomach and intestine), wound infections, and primary septicemia (spread of the organism through the blood). This organism is the major cause of death from eating raw oysters, especially in people with liver damage. It only affects humans and other primates.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
796013796642630hypothetical proteinBLASTP
7965467977661221hypothetical proteinBLASTP
797791798345555hypothetical proteinBLASTP
798347799102756hypothetical proteinBLASTP
799117799554438hypothetical proteinBLASTP
7995978013391743putative hemolysinQuickGO ontologyBLASTP
801398801601204hypothetical protein
801777802259483predicted transcriptional regulatorQuickGO ontologyBLASTP
8022448036141371hypothetical proteinBLASTP
804352805029678hypothetical protein
8051708066931524hypothetical protein
806984807628645hypothetical proteinBLASTP
8076658091401476hypothetical proteinBLASTP
809140809859720hypothetical proteinBLASTP
809941810360420hypothetical proteinBLASTP
810417810668252hypothetical proteinBLASTP
810680811216537ribonuclease HQuickGO ontologyBLASTP
811471811920450hypothetical proteinBLASTP
811990812424435hypothetical proteinBLASTP
812421812918498DNA repair proteinQuickGO ontologyBLASTP
813042813236195predicted transcriptional regulatorQuickGO ontologyBLASTP
813323813760438hypothetical proteinBLASTP
813868814077210hypothetical protein
8143278174133087type I site-specific restriction-modification system R restriction subunitQuickGO ontologyBLASTP
8174068187071302restriction endonuclease S subunitQuickGO ontologyBLASTP
8187048199151212anticodon nucleaseQuickGO ontologyBLASTP