Pre_GI Gene

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Host: NC_011094 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011094:638552 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
6385526417223171gp21QuickGO ontologyBLASTP
641747641863117hypothetical protein
641944642084141hypothetical protein
642072642419348phage minor tail proteinQuickGO ontologyBLASTP
642455643159705phage minor tail protein LQuickGO ontologyBLASTP
643848644012165hypothetical protein
6443586475373180gp29QuickGO ontologyBLASTP
647546648505960hypothetical protein
6485166496521137hypothetical proteinBLASTP
6502606514471188integraseQuickGO ontologyBLASTP
651947652093147hypothetical protein
652744652941198hypothetical proteinBLASTP
653043653639597hypothetical proteinBLASTP
654525654686162hypothetical protein
654796654960165hypothetical protein
655441655761321Ant2QuickGO ontologyBLASTP
655772656566795hypothetical proteinBLASTP
656563656868306hypothetical proteinBLASTP
656958657341384hypothetical protein
657334657981648hypothetical proteinBLASTP
6579916601322142P4 alpha zinc-binding domain-containing proteinQuickGO ontologyBLASTP
660129660524396ssDNA-binding proteinQuickGO ontologyBLASTP
660568661482915hypothetical proteinBLASTP
661576662379804gp23QuickGO ontologyBLASTP
662495662962468hypothetical protein
664203664547345phage holin lambda family proteinQuickGO ontologyBLASTP
664550665164615lytic enzymeQuickGO ontologyBLASTP
665161665697537protein gp55QuickGO ontologyBLASTP
665694665945252hypothetical proteinBLASTP
666021666554534hypothetical protein
666897667043147hypothetical protein
667212667709498hypothetical proteinBLASTP
6676816698102130phage terminase large subunitQuickGO ontologyBLASTP
669807670013207hypothetical proteinBLASTP
6700106715451536phage portal protein lambda family proteinQuickGO ontologyBLASTP
6715086735772070ATP-dependent proteaseQuickGO ontologyBLASTP