Pre_GI Gene

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Host: NC_016944 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_016944:514742 Vibrio cholerae IEC224 chromosome I, complete sequence

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: It was isolated in November of 1994 at the city of Belém/Pa from a stool sample. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
5147425161541413pyruvate kinaseQuickGO ontologyBLASTP
516582517352771DeoR family transcriptional regulatorQuickGO ontologyBLASTP
5174155192471833glucosamine--fructose-6-phosphate aminotransferaseQuickGO ontologyBLASTP
5193085203871080extracellular solute-binding proteinQuickGO ontologyBLASTP
5231645251251962hypothetical proteinBLASTP
525126525638513hypothetical proteinBLASTP
5256315267971167hypothetical proteinBLASTP
527053527928876hypothetical proteinBLASTP
528313528957645hypothetical proteinBLASTP
529019529693675hypothetical proteinBLASTP
529852530346495hypothetical proteinBLASTP
530410530610201transcriptional regulatorQuickGO ontologyBLASTP
530692531132441ribonuclease HQuickGO ontologyBLASTP
532079532204126transposase OrfAB subunit AQuickGO ontologyBLASTP
532252532404153transposaseQuickGO ontologyBLASTP
532907533395489transposaseQuickGO ontologyBLASTP
533368533817450transposaseQuickGO ontologyBLASTP
534206534730525type IV pilinQuickGO ontologyBLASTP
5356335367061074cell wall endopeptidase family M23M37QuickGO ontologyBLASTP
536884537111228hypothetical proteinBLASTP
537159537527369hypothetical proteinBLASTP
537558538292735hypothetical proteinBLASTP
538611539054444hypothetical proteinBLASTP
539104539541438hypothetical proteinBLASTP
539538540011474DNA repair protein RadC-likeproteinQuickGO ontologyBLASTP
5403235421341812hypothetical proteinBLASTP
5421345445992466hypothetical proteinBLASTP