Pre_GI Gene

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Host: NC_011745 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011745:3245000 Escherichia coli ED1a chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolated in the 2000s from the faeces of a healthy man in France. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
324529432460557622-deoxy-D-gluconate 3-dehydrogenaseQuickGO ontologyBLASTP
324608532469218375-keto-4-deoxyuronate isomeraseQuickGO ontologyBLASTP
324720832483891182acetyl-CoA acetyltransferaseQuickGO ontologyBLASTP
324864432498041161putative transporterQuickGO ontologyBLASTP
32508813251273393Antitermination protein Q from prophageQuickGO ontologyBLASTP
32514643251631168hypothetical protein
32517893252256468hypothetical protein
325283732539401104putative oxidoreductase KpLE2 phage-like elementQuickGO ontologyBLASTP
325395332551701218putative sialic acid transporterQuickGO ontologyBLASTP
32559183256358441putative single-stranded DNA-binding protein SSB Helix-destabilizing proteinQuickGO ontologyBLASTP
32563553256804450hypothetical protein
325709232589121821putative DNA primase from prophageQuickGO ontologyBLASTP
32589093259202294hypothetical proteinBLASTP
32592603259463204hypothetical proteinBLASTP
325964132609391299hypothetical proteinBLASTP
32605573260835279hypothetical protein
32609363261154219hypothetical protein
32611413261878738hypothetical proteinBLASTP
32618713262386516hypothetical protein
32624513262654204putative regulatory protein from prophage AlpA familyQuickGO ontologyBLASTP
32629173263084168hypothetical protein
32630623263235174hypothetical protein
326329732645501254Integrase from prophageQuickGO ontologyBLASTP
32648283265583756Tetratricopeptide repeat transcriptional regulatorQuickGO ontologyBLASTP
326603632682942259xanthine dehydrogenase subunit XdhAQuickGO ontologyBLASTP