Pre_GI Gene

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Host: NC_010498 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010498:4072681 Escherichia coli SMS-3-5, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli SMS-3-5 was isolated from a toxic-metal contaminated site, Shipyard Creek, Charleston, South Carolina, USA. This strain is highly resistant to a number of antibiotics. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
40726814073532852fructose-bisphosphate aldolase class IIQuickGO ontologyBLASTP
40749924075462471PTS system fructose family IIA componentQuickGO ontologyBLASTP
407548940770421554putative PTS regulatory proteinQuickGO ontologyBLASTP
40770764077189114hypothetical protein
407733740796552319alpha-xylosidaseQuickGO ontologyBLASTP
407966540810471383sugar glycoside-pentoside-hexuronide GPHcation symporter family proteinQuickGO ontologyBLASTP
4081340408143495tRNA-SecQuickGO ontologyBLASTP
408159740827601164phage integrase family site specific recombinaseQuickGO ontologyBLASTP
408277340854932721hypothetical proteinBLASTP
40856954086267573phage polarity suppression proteinQuickGO ontologyBLASTP
40865244087258735glycoprotein 3 capsid size determination protein SidQuickGO ontologyBLASTP
40878114088077267AlpA family transcriptional regulatorQuickGO ontologyBLASTP
40882604088664405phage proteinQuickGO ontologyBLASTP
40886574088944288hypothetical proteinBLASTP
40889374089392456hypothetical proteinBLASTP
40895284089848321hypothetical proteinBLASTP
408986340921962334D5 family nucleoside triphosphataseQuickGO ontologyBLASTP
40921514092267117hypothetical protein
40927834092929147hypothetical proteinBLASTP
409331140944951185sugar efflux transporter CQuickGO ontologyBLASTP
40946064095529924carboxylateamino acidamine transporterQuickGO ontologyBLASTP
40955334096351819lipoprotein NlpAQuickGO ontologyBLASTP
40965604096853294hypothetical proteinBLASTP