Pre_GI: BLASTN Hits

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Query: NC_002947:4484824 Pseudomonas putida KT2440, complete genome

Start: 4484824, End: 4516099, Length: 31276

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was derived from a toluene-degrading isolate, Pseudomonas arvilla strain mt-2 (renamed Pseudomonas putida mt-2), by loss of its plasmid. Common environmental bacterium. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015733:3736104*37361043837697101594Pseudomonas putida S16 chromosome, complete genome09190BLASTN svgBLASTP svg
NC_020209:1847895*1847895187267824784Pseudomonas poae RE*1-1-14, complete genome0682BLASTN svgBLASTP svg
NC_012660:2045398*2045398210849663099Pseudomonas fluorescens SBW25 chromosome, complete genome0809BLASTN svgBLASTP svg
NC_012660:57932005793200583260939410Pseudomonas fluorescens SBW25 chromosome, complete genome0848BLASTN svgBLASTP svg
NC_012560:2906459*2906459292809921641Azotobacter vinelandii DJ, complete genome0914BLASTN svgBLASTP svg
NC_021150:2906471*2906471292809921629Azotobacter vinelandii CA6, complete genome0914BLASTN svgBLASTP svg
NC_015379:25750002575000259943424435Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,01039BLASTN svgBLASTP svg
NC_015379:90890490890497110662203Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,01039BLASTN svgBLASTP svg
NC_008463:4566976*4566976460307636101Pseudomonas aeruginosa UCBPP-PA14, complete genome01439BLASTN svgBLASTP svg
NC_008027:23316172331617235762526009Pseudomonas entomophila L48, complete genome01491BLASTN svgBLASTP svg
NC_008463:52469545246954530671059757Pseudomonas aeruginosa UCBPP-PA14, complete genome02847BLASTN svgBLASTP svg
NC_002947:61525006152500618549933000Pseudomonas putida KT2440, complete genome03479BLASTN svgBLASTP svg
NC_010501:30000300007042840429Pseudomonas putida W619, complete genome03537BLASTN svgBLASTP svg
NC_002947:49943354994335504935655022Pseudomonas putida KT2440, complete genome04728BLASTN svgBLASTP svg
NC_009512:21086862108686214231433629Pseudomonas putida F1, complete genome07144BLASTN svgBLASTP svg
NC_007005:5500196*5500196552713626941Pseudomonas syringae pv. syringae B728a, complete genome0644BLASTN svgBLASTP svg
NC_004129:43333024333302435159918298Pseudomonas fluorescens Pf-5, complete genome5e-172613BLASTN svgBLASTP svg
NC_012660:26849812684981271787932899Pseudomonas fluorescens SBW25 chromosome, complete genome2e-162581BLASTN svgBLASTP svg
NC_012660:41494874149487417527325787Pseudomonas fluorescens SBW25 chromosome, complete genome9e-149535BLASTN svgBLASTP svg
NC_002947:53864895386489541416727679Pseudomonas putida KT2440, complete genome1e-101379BLASTN svgBLASTP svg
NC_015733:1555476*1555476160259947124Pseudomonas putida S16 chromosome, complete genome8e-100373BLASTN svgBLASTP svg
NC_015733:11799771179977119809918123Pseudomonas putida S16 chromosome, complete genome8e-100373BLASTN svgBLASTP svg
NC_002947:737924*73792476633928416Pseudomonas putida KT2440, complete genome8e-100373BLASTN svgBLASTP svg
NC_010645:406794*40679445127044477Bordetella avium 197N, complete genome1e-98369BLASTN svgBLASTP svg
NC_002947:46045824604582462867624095Pseudomonas putida KT2440, complete genome4e-95357BLASTN svgBLASTP svg
NC_010501:36715173671517370459933083Pseudomonas putida W619, complete genome3e-93351BLASTN svgBLASTP svg
NC_006350:13160001316000133759921600Burkholderia pseudomallei K96243 chromosome 1, complete sequence2e-91345BLASTN svgBLASTP svg
NC_008570:2014151*2014151204014925999Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome2e-85325BLASTN svgBLASTP svg
NC_004578:60899586089958612236632409Pseudomonas syringae pv. tomato str. DC3000, complete genome4e-83317BLASTN svgBLASTP svg
NC_014924:1701952*1701952172639224441Pseudoxanthomonas suwonensis 11-1 chromosome, complete genome9e-78299BLASTN svgBLASTP svg
NC_005773:48992524899252493544536194Pseudomonas syringae pv. phaseolicola 1448A, complete genome1e-76295BLASTN svgBLASTP svg
NC_009439:1174432*1174432119973625305Pseudomonas mendocina ymp, complete genome1e-67266BLASTN svgBLASTP svg
NC_009439:12978511297851133481436964Pseudomonas mendocina ymp, complete genome1e-67266BLASTN svgBLASTP svg
NC_009439:20545205454442723883Pseudomonas mendocina ymp, complete genome1e-67266BLASTN svgBLASTP svg
NC_009439:3394174*3394174341925525082Pseudomonas mendocina ymp, complete genome1e-67266BLASTN svgBLASTP svg
NC_009439:44289044289048900846119Pseudomonas mendocina ymp, complete genome1e-67266BLASTN svgBLASTP svg
NC_004578:4465247*4465247448346018214Pseudomonas syringae pv. tomato str. DC3000, complete genome2e-63252BLASTN svgBLASTP svg
NC_010501:26095672609567264709937533Pseudomonas putida W619, complete genome5e-61244BLASTN svgBLASTP svg
NC_002947:41675004167500424373376234Pseudomonas putida KT2440, complete genome3e-56228BLASTN svgBLASTP svg
NC_007005:830467*83046785407423608Pseudomonas syringae pv. syringae B728a, complete genome2e-54222BLASTN svgBLASTP svg
NC_003295:2507850*2507850254415436305Ralstonia solanacearum GMI1000, complete genome3e-53218BLASTN svgBLASTP svg
NC_009074:2914053*2914053293925825206Burkholderia pseudomallei 668 chromosome I, complete sequence2e-51212BLASTN svgBLASTP svg
NC_005773:4028500*4028500405209923600Pseudomonas syringae pv. phaseolicola 1448A, complete genome2e-48202BLASTN svgBLASTP svg
NC_004578:1190000*1190000121945029451Pseudomonas syringae pv. tomato str. DC3000, complete genome6e-48200BLASTN svgBLASTP svg
NC_004578:20738207386960648869Pseudomonas syringae pv. tomato str. DC3000, complete genome6e-48200BLASTN svgBLASTP svg
NC_004578:21246821246824209929632Pseudomonas syringae pv. tomato str. DC3000, complete genome6e-48200BLASTN svgBLASTP svg
NC_004578:26715082671508269955228045Pseudomonas syringae pv. tomato str. DC3000, complete genome6e-48200BLASTN svgBLASTP svg
NC_004578:32416183241618326508823471Pseudomonas syringae pv. tomato str. DC3000, complete genome6e-48200BLASTN svgBLASTP svg
NC_004578:35970833597083362009923017Pseudomonas syringae pv. tomato str. DC3000, complete genome6e-48200BLASTN svgBLASTP svg
NC_004578:40613724061372409399732626Pseudomonas syringae pv. tomato str. DC3000, complete genome6e-48200BLASTN svgBLASTP svg
NC_004578:4499143*4499143452348624344Pseudomonas syringae pv. tomato str. DC3000, complete genome6e-48200BLASTN svgBLASTP svg
NC_004578:895019*89501992169226674Pseudomonas syringae pv. tomato str. DC3000, complete genome6e-48200BLASTN svgBLASTP svg
NC_004578:61386696138669616309624428Pseudomonas syringae pv. tomato str. DC3000, complete genome6e-48200BLASTN svgBLASTP svg
NC_004578:59167115916711594513828428Pseudomonas syringae pv. tomato str. DC3000, complete genome6e-48200BLASTN svgBLASTP svg
NC_004578:5336773*5336773541660879836Pseudomonas syringae pv. tomato str. DC3000, complete genome6e-48200BLASTN svgBLASTP svg
NC_004578:49400004940000496327423275Pseudomonas syringae pv. tomato str. DC3000, complete genome6e-48200BLASTN svgBLASTP svg
NC_004578:47813264781326481642335098Pseudomonas syringae pv. tomato str. DC3000, complete genome6e-48200BLASTN svgBLASTP svg
NC_010682:2642269*2642269266509922831Ralstonia pickettii 12J chromosome 1, complete sequence2e-47198BLASTN svgBLASTP svg
NC_005773:26417152641715266373322019Pseudomonas syringae pv. phaseolicola 1448A, complete genome1e-39172BLASTN svgBLASTP svg
NC_018691:1322389*1322389134428821900Alcanivorax dieselolei B5 chromosome, complete genome2e-38168BLASTN svgBLASTP svg
NC_018691:18227311822731185319130461Alcanivorax dieselolei B5 chromosome, complete genome2e-38168BLASTN svgBLASTP svg
NC_018691:3525430*3525430358162756198Alcanivorax dieselolei B5 chromosome, complete genome2e-38168BLASTN svgBLASTP svg
NC_020209:19495001949500197652927030Pseudomonas poae RE*1-1-14, complete genome2e-38168BLASTN svgBLASTP svg
NC_020209:39737639737645309955724Pseudomonas poae RE*1-1-14, complete genome1e-36163BLASTN svgBLASTP svg
NC_015422:3836911*3836911386031223402Alicycliphilus denitrificans K601 chromosome, complete genome3e-34155BLASTN svgBLASTP svg
NC_020209:997385*997385104138844004Pseudomonas poae RE*1-1-14, complete genome2e-32149BLASTN svgBLASTP svg
NC_010125:14850014850017622727728Gluconacetobacter diazotrophicus PAl 5, complete genome1e-30143BLASTN svgBLASTP svg
NC_003902:1858349*1858349191581657468Xanthomonas campestris pv. campestris str. ATCC 33913, complete3e-28135BLASTN svgBLASTP svg
NC_004578:44329834432983445709924117Pseudomonas syringae pv. tomato str. DC3000, complete genome2e-26129BLASTN svgBLASTP svg
NC_016002:1326500*1326500135490028401Pseudogulbenkiania sp. NH8B, complete genome5e-24121BLASTN svgBLASTP svg
NC_015856:11520211152021117726325243Collimonas fungivorans Ter331 chromosome, complete genome5e-24121BLASTN svgBLASTP svg
NC_011992:1234610*1234610125759922990Acidovorax ebreus TPSY, complete genome1e-21113BLASTN svgBLASTP svg
NC_020209:47504*4750412622978726Pseudomonas poae RE*1-1-14, complete genome4e-21111BLASTN svgBLASTP svg
NC_015458:2614108*2614108264388729780Pusillimonas sp. T7-7 chromosome, complete genome4e-21111BLASTN svgBLASTP svg
NC_015740:45083754508375452814119767Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete2e-20109BLASTN svgBLASTP svg
NC_012856:2266187*2266187228576319577Ralstonia pickettii 12D chromosome 1, complete genome2e-20109BLASTN svgBLASTP svg
NC_008786:1936626*1936626196111324488Verminephrobacter eiseniae EF01-2, complete genome3e-19105BLASTN svgBLASTP svg
NC_013851:1866523*1866523188892822406Allochromatium vinosum DSM 180 chromosome, complete genome1e-18103BLASTN svgBLASTP svg
NC_016010:1822212*1822212190411881907Xanthomonas axonopodis pv. citrumelo F1 chromosome, complete4e-18101BLASTN svgBLASTP svg
NC_015379:46303674630367466559935233Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,4e-18101BLASTN svgBLASTP svg
NC_013446:4281250*4281250430762526376Comamonas testosteroni CNB-2, complete genome7e-1797.6BLASTN svgBLASTP svg
NC_004578:63347356334735636397929245Pseudomonas syringae pv. tomato str. DC3000, complete genome7e-1797.6BLASTN svgBLASTP svg
NC_015953:5444572*5444572547270028129Streptomyces sp. SirexAA-E chromosome, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_009649:16907169074359926693Klebsiella pneumoniae subsp. pneumoniae MGH 78578 plasmid pKPN3,4e-1591.7BLASTN svgBLASTP svg
NC_014931:5088125*5088125512272134597Variovorax paradoxus EPS chromosome, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_015422:1116359*1116359114310426746Alicycliphilus denitrificans K601 chromosome, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_016010:63753563753566446226928Xanthomonas axonopodis pv. citrumelo F1 chromosome, complete4e-1591.7BLASTN svgBLASTP svg
NC_020260:88230788230791401031704Cronobacter sakazakii Sp291, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_015856:3170771*3170771319449023720Collimonas fungivorans Ter331 chromosome, complete genome6e-1487.7BLASTN svgBLASTP svg
NC_015138:4205986*4205986423312827143Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete6e-1487.7BLASTN svgBLASTP svg
NC_007908:12521891252189127831426126Rhodoferax ferrireducens T118, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_007908:33639023363902338735723456Rhodoferax ferrireducens T118, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_009434:3611738*36117383748875137138Pseudomonas stutzeri A1501, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_011146:45058214505821453009924279Geobacter bemidjiensis Bem, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_015968:16188621618862164127522414Enterobacter asburiae LF7a chromosome, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_007404:15700001570000159185021851Thiobacillus denitrificans ATCC 25259, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_014910:1591003*1591003161459423592Alicycliphilus denitrificans BC chromosome, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_014910:19125521912552193924626695Alicycliphilus denitrificans BC chromosome, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_015422:28582282858228292680368576Alicycliphilus denitrificans K601 chromosome, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_015422:3184823*3184823320638321561Alicycliphilus denitrificans K601 chromosome, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_002927:4130697*4130697415192921233Bordetella bronchiseptica RB50, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_008781:3508784*3508784353338924606Polaromonas naphthalenivorans CJ2, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_012779:20645822064582209112726546Edwardsiella ictaluri 93-146, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_015379:2417312*2417312246459947288Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,2e-1179.8BLASTN svgBLASTP svg
NC_015566:3659318*3659318367796918652Serratia sp. AS12 chromosome, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_020181:2097066*2097066212464227577Enterobacter aerogenes EA1509E, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_002946:68472868472870809923372Neisseria gonorrhoeae FA 1090, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_003143:16300001630000167609946100Yersinia pestis CO92, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_006155:17560001756000179467638677Yersinia pseudotuberculosis IP 32953, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_008149:28023922802392285367651285Yersinia pestis Nepal516, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_008150:84472784472789009945373Yersinia pestis Antiqua, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_010634:17555481755548179542439877Yersinia pseudotuberculosis PB1/+, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_011386:2073726*2073726211598742262Oligotropha carboxidovorans OM5, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_012660:4734363*4734363475525820896Pseudomonas fluorescens SBW25 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_013421:30939953093995311483420840Pectobacterium wasabiae WPP163, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_015684:2033985*2033985205409920115Oligotropha carboxidovorans OM5 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_019940:2893535*2893535291820624672Thioflavicoccus mobilis 8321 chromosome, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_007005:45158534515853454582229970Pseudomonas syringae pv. syringae B728a, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_008782:2568027*2568027262351455488Acidovorax sp. JS42, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_011894:6888562*6888562695715868597Methylobacterium nodulans ORS 2060, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_014830:4012999*4012999403999927001Intrasporangium calvum DSM 43043 chromosome, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_015733:59098215909821595513745317Pseudomonas putida S16 chromosome, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_014168:86974686974691121841473Segniliparus rotundus DSM 44985 chromosome, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_010725:4219500*4219500425012730628Methylobacterium populi BJ001, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_010172:4064087*4064087410309939013Methylobacterium extorquens PA1, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_010170:1661915*1661915168523723323Bordetella petrii, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_009937:3748885*3748885376963220748Azorhizobium caulinodans ORS 571, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_003296:67379067379072609952310Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, complete6e-0867.9BLASTN svgBLASTP svg
NC_008027:55333115533311555523921929Pseudomonas entomophila L48, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015186:347346*34734637448527140Acidiphilium multivorum AIU301, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_020209:19865031986503202425537753Pseudomonas poae RE*1-1-14, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_014831:8965*89654370634742Thermaerobacter marianensis DSM 12885 chromosome, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_012660:3689223*3689223371658727365Pseudomonas fluorescens SBW25 chromosome, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_010512:10155571015557104522129665Burkholderia cenocepacia MC0-3 chromosome 3, complete sequence9e-0763.9BLASTN svgBLASTP svg
NC_006177:12383*123833284720465Symbiobacterium thermophilum IAM 14863, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_008095:16971571697157172169424538Myxococcus xanthus DK 1622, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_007947:1556437*1556437158119324757Methylobacillus flagellatus KT, complete genome4e-0661.9BLASTN svgBLASTP svg