Pre_GI Gene

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Host: NC_012660 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012660:4149487 Pseudomonas fluorescens SBW25 chromosome, complete genome

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Isolated in 1989 from the leaf surface of a sugar beet plant grown at the University Farm, Wytham, Oxford, UK. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
414948741516342148putative tonB-dependent receptorQuickGO ontologyBLASTP
41518294151987159hypothetical protein
41519934152619627putative DNA binding proteinQuickGO ontologyBLASTP
41534604153729270hypothetical protein
41539084154621714putative lipoproteinQuickGO ontologyBLASTP
41549024155138237hypothetical protein
41551394155495357hypothetical protein
41559794156377399hypothetical protein
41564524157360909putative sensory box GGDEFEAL domain-containing proteinQuickGO ontologyBLASTP
41578804158134255hypothetical protein
41586944159563870putative AraC family transcriptional regulatorQuickGO ontologyBLASTP
41599134160437525hypothetical protein
41606574161028372hypothetical protein
41618124162261450hypothetical protein
41623314163146816hypothetical proteinBLASTP
41631724163321150hypothetical proteinBLASTP
41638584164529672putative carriertransport proteinQuickGO ontologyBLASTP
416460641656251020UDP-N-acetylenolpyruvoylglucosamine reductaseQuickGO ontologyBLASTP
41656224166086465low molecular weight phosphotyrosine protein phosphataseQuickGO ontologyBLASTP
416608641668507653-deoxy-manno-octulosonate cytidylyltransferaseQuickGO ontologyBLASTP
41668474167032186hypothetical proteinBLASTP
416705741680671011tetraacyldisaccharide 4-kinaseQuickGO ontologyBLASTP
41680674168495429biopolymer transport proteinQuickGO ontologyBLASTP
41684924169127636putative biopolymer transport proteinQuickGO ontologyBLASTP
416921141714362226hypothetical proteinBLASTP
41715724172087516hypothetical proteinBLASTP
417252041752732754hybrid sensory histidine kinase in two-component regulatory system with UvrYQuickGO ontologyBLASTP