Pre_GI Gene

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Host: NC_010501 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010501:30000 Pseudomonas putida W619, complete genome

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas putida is a common endophytic and rhizosphere bacterium. Pseudomonas putida W619 was isolated from the Black Cottonwood tree and is closely related to other endophytic and rhizosphere strains of Pseudomonas putida. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
3011631138102340-residue YVTN family beta-propeller repeat proteinQuickGO ontologyBLASTP
3140431595192Heavy metal transportdetoxification proteinQuickGO ontologyBLASTP
31942343292388copper-translocating P-type ATPaseQuickGO ontologyBLASTP
3474134947207putative transcriptional regulatorQuickGO ontologyBLASTP
3567936488810hypothetical proteinBLASTP
3667236977306hypothetical proteinBLASTP
3723538023789Silent information regulator protein Sir2QuickGO ontologyBLASTP
3823038886657hypothetical proteinBLASTP
3929939607309hypothetical proteinBLASTP
3963040172543hypothetical proteinBLASTP
40313418481536transposase IS66QuickGO ontologyBLASTP
4191242247336IS66 Orf2 family proteinQuickGO ontologyBLASTP
4224442564321transposase IS3IS911 family proteinQuickGO ontologyBLASTP
4276543496732hypothetical proteinBLASTP
4429144419129hypothetical proteinBLASTP
44542462391698protein of unknown function DUF1705QuickGO ontologyBLASTP
4712348028906cation diffusion facilitator family transporterQuickGO ontologyBLASTP
4818648536351hypothetical proteinBLASTP
4856948895327hypothetical proteinBLASTP
4958550259675two component heavy metal response transcriptional regulator winged helix familyQuickGO ontologyBLASTP
50256516741419heavy metal sensor signal transduction histidine kinaseQuickGO ontologyBLASTP
5173252319588hypothetical proteinBLASTP
5258652807222hypothetical proteinBLASTP
52890543441455glycosyl transferase family 39QuickGO ontologyBLASTP
5433855321984Ribonuclease IIIQuickGO ontologyBLASTP
5528755706420GtrA family proteinQuickGO ontologyBLASTP
5596456932969transcriptional regulator LysR familyQuickGO ontologyBLASTP
57143584501308phosphate-selective porin O and PQuickGO ontologyBLASTP
5847058604135hypothetical proteinBLASTP
58749597741026hypothetical proteinBLASTP
5990260126225hypothetical proteinBLASTP
60219622161998heavy metal translocating P-type ATPaseQuickGO ontologyBLASTP
6241962742324hypothetical proteinBLASTP
62905660663162heavy metal efflux pump CzcA familyQuickGO ontologyBLASTP
66091673411251efflux transporter RND family MFP subunitQuickGO ontologyBLASTP
67410686811272outer membrane efflux proteinQuickGO ontologyBLASTP
69085704281344outer membrane porinQuickGO ontologyBLASTP