Pre_GI Gene

Some Help

Host: NC_007005 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_007005:4515853 Pseudomonas syringae pv. syringae B728a, complete genome

Host Lineage: Pseudomonas syringae; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain is the causal agent of brown spot disease on beans. It was isolated from a snap bean leaflet in Wisconsin, USA. Plant pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
451585345168811029hypothetical proteinBLASTP
451687845181401263Major facilitator superfamilyQuickGO ontologyBLASTP
45182474519140894regulatory protein LysRLysR substrate-bindingQuickGO ontologyBLASTP
451915645202681113hypothetical proteinBLASTP
452042845217201293MscS Mechanosensitive ion channelQuickGO ontologyBLASTP
452220545243012097ATP-dependent DNA helicase RecQQuickGO ontologyBLASTP
452429845256651368unnamed protein product similar to a putative DNA processing proteinQuickGO ontologyBLASTP
45263314526816486hypothetical proteinBLASTP
452790245291161215hypothetical proteinBLASTP
45291134529592480hypothetical proteinBLASTP
452958945314391851hypothetical proteinBLASTP
45315824532403822Integrase catalytic regionQuickGO ontologyBLASTP
45324604532759300Transposase IS3IS911QuickGO ontologyBLASTP
45336484534502855type III effector HopAF1QuickGO ontologyBLASTP
45352754535808534GCN5-related N-acetyltransferaseQuickGO ontologyBLASTP
453599545381152121hypothetical protein
453884245411032262hypothetical proteinBLASTP
454117945426031425hypothetical proteinBLASTP
45438184544201384hypothetical proteinBLASTP
45442584544833576Protein of unknown function DUF1349QuickGO ontologyBLASTP
45452774545822546hypothetical proteinBLASTP