Pre_GI Gene

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Host: NC_012660 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012660:4734363 Pseudomonas fluorescens SBW25 chromosome, complete genome

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Isolated in 1989 from the leaf surface of a sugar beet plant grown at the University Farm, Wytham, Oxford, UK. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
47343634734665303hypothetical protein
47346784735574897LysR family transcriptional regulatorQuickGO ontologyBLASTP
47356974736362666putative aldolaseQuickGO ontologyBLASTP
473635947375641206aspartate aminotransferaseQuickGO ontologyBLASTP
473766047389551296putative proton glutamate symport proteinQuickGO ontologyBLASTP
47391794739637459putative heat shock protein AQuickGO ontologyBLASTP
47404214740801381hypothetical protein
47417314741925195hypothetical protein
47420534742439387hypothetical proteinBLASTP
4745921474599373tRNA-AsnQuickGO ontologyBLASTP
47460544746950897LysR family transcriptional regulatorQuickGO ontologyBLASTP
474703647481931158L-lactate dehydrogenaseQuickGO ontologyBLASTP
47484754749422948putative GGDEFGAF domain sensory box proteinQuickGO ontologyBLASTP
47494804750280801hypothetical proteinBLASTP
475032747527892463putative signaling-related membrane proteinQuickGO ontologyBLASTP
475286147546631803putative ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
47546564755258603hypothetical proteinBLASTP