Pre_GI Gene

Some Help

Host: NC_012660 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012660:3689223 Pseudomonas fluorescens SBW25 chromosome, complete genome

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Isolated in 1989 from the leaf surface of a sugar beet plant grown at the University Farm, Wytham, Oxford, UK. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
36892233690050828hypothetical proteinBLASTP
36900803690841762short chain dehydrogenaseQuickGO ontologyBLASTP
36908833691128246hypothetical protein
36912883691878591TetR family transcriptional regulatorQuickGO ontologyBLASTP
369204536931451101putative morphinone reductaseQuickGO ontologyBLASTP
36931983693986789short chain dehydrogenaseQuickGO ontologyBLASTP
36946433695641999zinc-binding dehydrogenaseQuickGO ontologyBLASTP
36956913696515825short chain dehydrogenaseQuickGO ontologyBLASTP
36970573697761705hypothetical proteinBLASTP
36977753698467693hypothetical protein
36987663699563798hypothetical protein
36998703700610741hypothetical protein
37006563701207552hypothetical protein
37012333701637405hypothetical proteinBLASTP
37020103702621612hypothetical protein
37030193703990972integrase pseudogeneQuickGO ontologyBLASTP
37041363704810675hypothetical proteinBLASTP
37048073705265459putative RNA polymerase sigma factorQuickGO ontologyBLASTP
37054983706091594hypothetical proteinBLASTP
370641637081191704putative methyl-accepting chemotaxis proteinQuickGO ontologyBLASTP
3708738370880871tRNA-CysQuickGO ontology
370902137113062286putative amidaseQuickGO ontologyBLASTP
37115443711924381hypothetical protein
37119403712128189hypothetical protein
37122513713177927putative LysR family transcriptional regulatorQuickGO ontologyBLASTP
37132963714291996putative aldoketo reductaseQuickGO ontologyBLASTP
371459337165871995putative methyl-accepting chemotaxis receptor proteinQuickGO ontologyBLASTP