Pre_GI Gene

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Host: NC_002947 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_002947:5386489 Pseudomonas putida KT2440, complete genome

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was derived from a toluene-degrading isolate, Pseudomonas arvilla strain mt-2 (renamed Pseudomonas putida mt-2), by loss of its plasmid. Common environmental bacterium. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
538648953892992811D-lactate dehydrogenase putativeQuickGO ontologyBLASTP
53896195389909291hypothetical proteinBLASTP
53907675391009243hypothetical proteinBLASTP
539305753954202364type I restriction-modification system R subunitQuickGO ontologyBLASTP
539552153969901470type I restriction-modification system M subunitQuickGO ontologyBLASTP
539698753987171731type I restriction-modification system S subunitQuickGO ontologyBLASTP
539918654006221437hypothetical proteinBLASTP
540179054033221533ISPpu15 transposase Orf2QuickGO ontologyBLASTP
54033415403700360ISPpu15 transposase Orf1QuickGO ontologyBLASTP
54044175405217801amino acid ABC transporter periplasmic amino acid-binding proteinQuickGO ontologyBLASTP
54053085405967660amino acid ABC transporter permease proteinQuickGO ontologyBLASTP
54059645406605642amino acid ABC transporter permease proteinQuickGO ontologyBLASTP
54066055407414810amino acid ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
540742854087351308aminopeptidase putativeQuickGO ontologyBLASTP
540883754108732037N-methylproline demethylase putativeQuickGO ontologyBLASTP
54109975411644648transcriptional regulator TetR familyQuickGO ontologyBLASTP
541177454141672394outer membrane ferrichrome-iron receptorQuickGO ontologyBLASTP