Pre_GI: BLASTN Hits

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Query: NC_015224:1067390 Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,

Start: 1067390, End: 1106717, Length: 39328

Host Lineage: Yersinia enterocolitica; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This species is a food and waterborn pathogen that causes gastroenteritis (inflammation of the mucous membranes of the stomach and intestine) and is able to proliferate at temperatures as low as 4 degrees C.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015224:14402831440283145849618214Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,02974BLASTN svgBLASTP svg
NC_015224:3892972*3892972393636443393Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,02954BLASTN svgBLASTP svg
NC_015224:4386599*4386599441050923911Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,02930BLASTN svgBLASTP svg
NC_015224:88953688953690956920034Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,02906BLASTN svgBLASTP svg
NC_015224:35875003587500361767930180Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,02906BLASTN svgBLASTP svg
NC_015224:17638481763848179825034403Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,02845BLASTN svgBLASTP svg
NC_015224:2061951*2061951208443822488Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,02811BLASTN svgBLASTP svg
NC_015224:32917363291736331359921864Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,02807BLASTN svgBLASTP svg
NC_015224:3225000*3225000325159926600Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,02773BLASTN svgBLASTP svg
NC_015224:17031301703130172897125842Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,02759BLASTN svgBLASTP svg
NC_010465:11181471118147115423036084Yersinia pseudotuberculosis YPIII, complete genome01114BLASTN svgBLASTP svg
NC_008150:51378351378354909935317Yersinia pestis Antiqua, complete genome01098BLASTN svgBLASTP svg
NC_005810:31423843142384317894536562Yersinia pestis biovar Microtus str. 91001, complete genome01098BLASTN svgBLASTP svg
NC_010159:34484903448490348540936920Yersinia pestis Angola, complete genome8e-159569BLASTN svgBLASTP svg
NC_010634:35098803509880354653836659Yersinia pseudotuberculosis PB1/+, complete genome3e-152547BLASTN svgBLASTP svg
NC_006155:35961203596120363277836659Yersinia pseudotuberculosis IP 32953, complete genome3e-152547BLASTN svgBLASTP svg
NC_008149:33732293373229340909935871Yersinia pestis Nepal516, complete genome4e-145523BLASTN svgBLASTP svg
NC_004088:35053833505383354055935177Yersinia pestis KIM, complete genome4e-145523BLASTN svgBLASTP svg
NC_003143:87536787536791053535169Yersinia pestis CO92, complete genome4e-145523BLASTN svgBLASTP svg
NC_015566:40490004049000406909920100Serratia sp. AS12 chromosome, complete genome2e-66262BLASTN svgBLASTP svg
NC_015224:27903727903730366824632Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,4e-62248BLASTN svgBLASTP svg
NC_020064:35175003517500354133523836Serratia marcescens FGI94, complete genome2e-54222BLASTN svgBLASTP svg
NC_015224:38203383820338386215341816Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,3e-47198BLASTN svgBLASTP svg
NC_015224:27019142701914272426222349Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,1e-37167BLASTN svgBLASTP svg
NC_005810:87267287267291210839437Yersinia pestis biovar Microtus str. 91001, complete genome4e-34155BLASTN svgBLASTP svg
NC_006155:11913071191307123066739361Yersinia pseudotuberculosis IP 32953, complete genome4e-34155BLASTN svgBLASTP svg
NC_006155:30407693040769306409923331Yersinia pseudotuberculosis IP 32953, complete genome4e-34155BLASTN svgBLASTP svg
NC_006155:32127963212796323445221657Yersinia pseudotuberculosis IP 32953, complete genome4e-34155BLASTN svgBLASTP svg
NC_008149:15565811556581157548818908Yersinia pestis Nepal516, complete genome4e-34155BLASTN svgBLASTP svg
NC_005810:29053622905362292838523024Yersinia pestis biovar Microtus str. 91001, complete genome4e-34155BLASTN svgBLASTP svg
NC_005810:26134562613456263609922644Yersinia pestis biovar Microtus str. 91001, complete genome4e-34155BLASTN svgBLASTP svg
NC_004088:22272782227278224825620979Yersinia pestis KIM, complete genome4e-34155BLASTN svgBLASTP svg
NC_004088:18018191801819182425322435Yersinia pestis KIM, complete genome4e-34155BLASTN svgBLASTP svg
NC_004088:16229411622941164556522625Yersinia pestis KIM, complete genome4e-34155BLASTN svgBLASTP svg
NC_004088:11968751196875123427537401Yersinia pestis KIM, complete genome4e-34155BLASTN svgBLASTP svg
NC_003143:33468343346834337009923266Yersinia pestis CO92, complete genome4e-34155BLASTN svgBLASTP svg
NC_003143:28493772849377287209922723Yersinia pestis CO92, complete genome4e-34155BLASTN svgBLASTP svg
NC_008149:1842500*1842500188064438145Yersinia pestis Nepal516, complete genome4e-34155BLASTN svgBLASTP svg
NC_008149:24111612411161243409922939Yersinia pestis Nepal516, complete genome4e-34155BLASTN svgBLASTP svg
NC_008150:1705152*1705152174460539454Yersinia pestis Antiqua, complete genome4e-34155BLASTN svgBLASTP svg
NC_010634:3269010*3269010329227823269Yersinia pseudotuberculosis PB1/+, complete genome4e-34155BLASTN svgBLASTP svg
NC_010634:29600002960000298209922100Yersinia pseudotuberculosis PB1/+, complete genome4e-34155BLASTN svgBLASTP svg
NC_010634:11754041175404121321037807Yersinia pseudotuberculosis PB1/+, complete genome4e-34155BLASTN svgBLASTP svg
NC_010465:22828742282874230925826385Yersinia pseudotuberculosis YPIII, complete genome4e-34155BLASTN svgBLASTP svg
NC_010465:15506171550617157325522639Yersinia pseudotuberculosis YPIII, complete genome4e-34155BLASTN svgBLASTP svg
NC_010159:409500*40950045168242183Yersinia pestis Angola, complete genome4e-34155BLASTN svgBLASTP svg
NC_010159:28784992878499290014121643Yersinia pestis Angola, complete genome4e-34155BLASTN svgBLASTP svg
NC_010159:22523802252380227191719538Yersinia pestis Angola, complete genome4e-34155BLASTN svgBLASTP svg
NC_010159:18614651861465188409922635Yersinia pestis Angola, complete genome4e-34155BLASTN svgBLASTP svg
NC_010159:12880001288000132559537596Yersinia pestis Angola, complete genome4e-34155BLASTN svgBLASTP svg
NC_008150:43737224373722439711823397Yersinia pestis Antiqua, complete genome4e-34155BLASTN svgBLASTP svg
NC_008150:25996612599661262209922439Yersinia pestis Antiqua, complete genome4e-34155BLASTN svgBLASTP svg
NC_008150:24518722451872247509923228Yersinia pestis Antiqua, complete genome4e-34155BLASTN svgBLASTP svg
NC_006155:34564883456488347575719270Yersinia pseudotuberculosis IP 32953, complete genome2e-33153BLASTN svgBLASTP svg
NC_010634:33680003368000339029322294Yersinia pseudotuberculosis PB1/+, complete genome2e-33153BLASTN svgBLASTP svg
NC_003143:28045002804500282209917600Yersinia pestis CO92, complete genome1e-31147BLASTN svgBLASTP svg
NC_003143:31159333115933313845922527Yersinia pestis CO92, complete genome1e-31147BLASTN svgBLASTP svg
NC_004088:12657301265730129020024471Yersinia pestis KIM, complete genome1e-31147BLASTN svgBLASTP svg
NC_004088:1851500*1851500188954638047Yersinia pestis KIM, complete genome1e-31147BLASTN svgBLASTP svg
NC_005810:12309761230976125037019395Yersinia pestis biovar Microtus str. 91001, complete genome1e-31147BLASTN svgBLASTP svg
NC_005810:25496802549680258809938420Yersinia pestis biovar Microtus str. 91001, complete genome1e-31147BLASTN svgBLASTP svg
NC_008149:11956141195614122004824435Yersinia pestis Nepal516, complete genome1e-31147BLASTN svgBLASTP svg
NC_008150:28226892822689284340720719Yersinia pestis Antiqua, complete genome1e-31147BLASTN svgBLASTP svg
NC_010159:18185001818500183609917600Yersinia pestis Angola, complete genome1e-31147BLASTN svgBLASTP svg
NC_010465:17240001724000174609922100Yersinia pseudotuberculosis YPIII, complete genome1e-31147BLASTN svgBLASTP svg
NC_010634:31291743129174315220423031Yersinia pseudotuberculosis PB1/+, complete genome1e-31147BLASTN svgBLASTP svg
NC_010634:28946312894631293584741217Yersinia pseudotuberculosis PB1/+, complete genome6e-30141BLASTN svgBLASTP svg
NC_006155:29795002979500301649636997Yersinia pseudotuberculosis IP 32953, complete genome6e-30141BLASTN svgBLASTP svg
NC_006155:28938022893802291787224071Yersinia pseudotuberculosis IP 32953, complete genome2e-29139BLASTN svgBLASTP svg
NC_010634:28108152810815283272221908Yersinia pseudotuberculosis PB1/+, complete genome2e-29139BLASTN svgBLASTP svg
NC_012912:84433984433986800523667Dickeya zeae Ech1591, complete genome6e-27131BLASTN svgBLASTP svg
NC_013416:1429881*1429881145213822258Aggregatibacter actinomycetemcomitans D11S-1, complete genome3e-19105BLASTN svgBLASTP svg
NC_010468:906957*90695794803541079Escherichia coli ATCC 8739, complete genome3e-19105BLASTN svgBLASTP svg
CP002516:903241*90324194330840068Escherichia coli KO11, complete genome3e-19105BLASTN svgBLASTP svg
NC_004431:4270305*4270305431798947685Escherichia coli CFT073, complete genome1e-18103BLASTN svgBLASTP svg
NC_008149:36481393648139368280234664Yersinia pestis Nepal516, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_008150:37119533711953374731835366Yersinia pestis Antiqua, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_015224:13910881391088142166930582Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,8e-1487.7BLASTN svgBLASTP svg
NC_010634:3692321*3692321371595823638Yersinia pseudotuberculosis PB1/+, complete genome8e-1487.7BLASTN svgBLASTP svg
NC_006155:3779381*3779381380559426214Yersinia pseudotuberculosis IP 32953, complete genome8e-1487.7BLASTN svgBLASTP svg
AC_000091:29762932976293300863132339Escherichia coli W3110 DNA, complete genome1e-1283.8BLASTN svgBLASTP svg
CP002185:3167738*3167738320702439287Escherichia coli W, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_000913:2975659*2975659300672831070Escherichia coli K12, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_009800:29959582995958302338427427Escherichia coli HS, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_010473:3069529*3069529310059831070Escherichia coli str. K-12 substr. DH10B, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_010465:14271701427170145224325074Yersinia pseudotuberculosis YPIII, complete genome7e-0867.9BLASTN svgBLASTP svg
NC_008150:25747942574794259632821535Yersinia pestis Antiqua, complete genome7e-0867.9BLASTN svgBLASTP svg
NC_005810:3021913*3021913304567123759Yersinia pestis biovar Microtus str. 91001, complete genome7e-0867.9BLASTN svgBLASTP svg
NC_003143:31912463191246321275521510Yersinia pestis CO92, complete genome7e-0867.9BLASTN svgBLASTP svg
NC_010465:80424980424984108836840Yersinia pseudotuberculosis YPIII, complete genome3e-0765.9BLASTN svgBLASTP svg