Pre_GI: BLASTP Hits

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Query: NC_009512:2108686:2131377 Pseudomonas putida F1, complete genome

Start: 2131377, End: 2132363, Length: 987

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from a polluted creek in Urbana, Illinois, USA by enrichment culture with ethylbenzyne as a sole source of carbon and energy. Its ability to degrade several different compounds including benzene, toluene, and ethylbenzene makes this species useful in the bioremediation of sites contaminated with multiple aromatic hydrocarbons. Underground gasoline tanks which have developed leaks can contaminate soil and water with a variety of these compounds. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020064:3998715:400839140083914009290900Serratia marcescens FGI94, complete genometranscriptional regulator5e-57221
NC_016514:1183356:118534511853451186274930Enterobacter cloacae EcWSU1 chromosome, complete genomemau operon transcriptional activator5e-52204
NC_013854:2714033:272876027287602729704945Azospirillum sp. B510, complete genometranscriptional regulator9e-37154
NC_020064:1409596:144578714457871446662876Serratia marcescens FGI94, complete genometranscriptional regulator2e-34146
NC_008740:3520500:353388335338833534722840Marinobacter aquaeolei VT8, complete genometranscriptional regulator, LysR family1e-31137
NC_009439:3485000:349808734980873498971885Pseudomonas mendocina ymp, complete genomeLysR family transcriptional regulator4e-30132
NC_014923:1249267:125214612521461253042897Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeLysR substrate-binding protein2e-29129
NC_008043:167108:179563179563180438876Silicibacter sp. TM1040 mega plasmid, complete sequencetranscriptional regulator, LysR family5e-28125
NC_010511:4313769:434019643401964341101906Methylobacterium sp. 4-46 chromosome, complete genomeLysR family transcriptional regulator6e-28124
NC_009485:1222697:122572012257201226622903Bradyrhizobium sp. BTAi1 chromosome, complete genomeLysR family transcriptional regulator3e-27122
NC_012982:1899973:189997318999731900857885Hirschia baltica ATCC 49814, complete genometranscriptional regulator, LysR family1e-26120
NC_008027:713500:713582713582714532951Pseudomonas entomophila L48, complete genometranscriptional regulator, LysR family1e-26120
NC_008209:2367500:238556023855602386456897Roseobacter denitrificans OCh 114, complete genometranscriptional regulator, LysR family, putative4e-26119
NC_004578:3597083:360071336007133601621909Pseudomonas syringae pv. tomato str. DC3000, complete genometranscriptional regulator, LysR family7e-24111
NC_011992:1912200:192978919297891930700912Acidovorax ebreus TPSY, complete genometranscriptional regulator, LysR family2e-23110
NC_009436:2056000:205954820595482060441894Enterobacter sp. 638, complete genomeLysR family transcriptional regulator3e-23109
NC_008314:1465643:148490714849071485779873Ralstonia eutropha H16 chromosome 2, complete sequencetranscriptional regulator, LysR-family3e-23109
NC_010623:1961685:201239920123992013322924Burkholderia phymatum STM815 chromosome 2, complete sequencetranscriptional regulator, LysR family5e-23108
NC_012660:5242392:526715152671515268029879Pseudomonas fluorescens SBW25 chromosome, complete genomeputative LysR family transcriptional regulator8e-23107
NC_015376:3320818:334604133460413346937897Burkholderia gladioli BSR3 chromosome chromosome 2, completeTranscriptional regulator, LysR family protein2e-22106
NC_008391:271254:292778292778293659882Burkholderia cepacia AMMD chromosome 2, complete sequencetranscriptional regulator, LysR family3e-22105
NC_014006:3124818:314139031413903142250861Sphingobium japonicum UT26S chromosome 1, complete genomeLysR-family transcriptional regulator3e-22105
NC_010505:5077162:508171750817175082577861Methylobacterium radiotolerans JCM 2831, complete genometranscriptional regulator, LysR family9e-22104
NC_015567:69190:932949329494157864Serratia sp. AS9 chromosome, complete genomeLysR family transcriptional regulator1e-21103
NC_015566:69190:932949329494157864Serratia sp. AS12 chromosome, complete genomeLysR family transcriptional regulator1e-21103
NC_010322:3315024:332407533240753324281207Pseudomonas putida GB-1 chromosome, complete genomeLysR family transcriptional regulator2e-21103
NC_013440:6045708:605520060552006056150951Haliangium ochraceum DSM 14365, complete genometranscriptional regulator, LysR family3e-21102
NC_020064:1409596:143049414304941431363870Serratia marcescens FGI94, complete genometranscriptional regulator3e-21102
NC_010170:4196197:420587642058764206748873Bordetella petrii, complete genometranscriptional regulator, LysR-family5e-21102
NC_020911:83717:915289152892433906Octadecabacter antarcticus 307, complete genomeLysR family transcriptional regulator9e-21101
NC_014306:4901390:493026549302654931143879Erwinia billingiae Eb661, complete genomeTranscriptional regulator, LysR family3e-2099.8
NC_007336:66000:792207922080143924Ralstonia eutropha JMP134 megaplasmid, complete sequenceregulatory protein, LysR:LysR, substrate-binding3e-2099.4
NC_008027:2996947:301307030130703013912843Pseudomonas entomophila L48, complete genometranscriptional regulator, LysR family4e-2099
NC_003047:3202125:321489732148973215844948Sinorhizobium meliloti 1021, complete genomePUTATIVE TRANSCRIPTION REGULATOR PROTEIN5e-2098.6
NC_011283:2323687:233464923346492335515867Klebsiella pneumoniae 342 chromosome, complete genomeLysR family transcriptional regulator7e-2098.2
NC_005296:4574213:461506746150674615990924Rhodopseudomonas palustris CGA009, complete genometranscriptional regulator, LysR family1e-1997.8
NC_016642:990058:996289996289997134846Pseudovibrio sp. FO-BEG1 chromosome, complete genometranscriptional regulator, LysR family protein2e-1996.7
NC_014034:1418681:144301014430101443876867Rhodobacter capsulatus SB1003 chromosome, complete genomeLysR family transcriptional regulator2e-1996.7
NC_011000:2732330:275714127571412757803663Burkholderia cenocepacia J2315 chromosome 1, complete sequenceLysR family regulatory protein4e-1995.9
NC_010943:1332243:134478413447841345635852Stenotrophomonas maltophilia K279a, complete genomeputative LysR family transcriptional regulator6e-1995.1
NC_014307:1855356:188089118808911881796906Ralstonia solanacearum CFBP2957 chromosome, complete genomeLysR family transcriptional regulator1e-1894.4
NC_003902:4430621:443306444330644433990927Xanthomonas campestris pv. campestris str. ATCC 33913, completeLysR family transcriptional regulator1e-1894
NC_007086:4489153:449064744906474491573927Xanthomonas campestris pv. campestris str. 8004, complete genometranscriptional regulator lysR family1e-1894
NC_011283:1811000:183321818332181834075858Klebsiella pneumoniae 342 chromosome, complete genomeLysR family transcriptional regulator2e-1893.6
NC_015563:3511951:351544035154403516342903Delftia sp. Cs1-4 chromosome, complete genomeLysR family transcriptional regulator4e-1892.4
NC_006569:370846:386564386564387508945Silicibacter pomeroyi DSS-3 megaplasmid, complete sequencetranscriptional regulator, LysR family1e-1790.9
NC_011283:1901229:190437519043751905256882Klebsiella pneumoniae 342 chromosome, complete genomeLysR family transcriptional regulator3e-1789.4
NC_014323:3976351:400095440009544001847894Herbaspirillum seropedicae SmR1 chromosome, complete genometranscription regulator protein8e-1787.8
NC_018643:807405:810184810184811074891Alpha proteobacterium HIMB5 chromosome, complete genomeBacterial regulatory helix-turn-helix protein, lysR family,ligand-binding protein, LysR family2e-1686.7
NC_012522:7871173:787993578799357880831897Rhodococcus opacus B4, complete genomeputative LysR family transcriptional regulator4e-1685.5
NC_010170:1219641:123007512300751230983909Bordetella petrii, complete genometranscriptional regulator, LysR-family1e-1584
NC_010162:11766000:117806901178069011781637948Sorangium cellulosum 'So ce 56', complete genomeLysR family transcriptional regulator2e-1583.2
NC_009439:3535152:355290635529063553790885Pseudomonas mendocina ymp, complete genomeLysR family transcriptional regulator9e-1581.3
NC_017030:6558624:656335765633576564262906Corallococcus coralloides DSM 2259 chromosome, complete genomeLysR family transcriptional regulator1e-1480.9
NC_015566:4350080:435592243559224356833912Serratia sp. AS12 chromosome, complete genomeLysR family transcriptional regulator1e-1480.5
NC_009512:2238437:224420022442002245156957Pseudomonas putida F1, complete genometranscriptional regulator, LysR family4e-1479.3
NC_017030:6912830:692651169265116927452942Corallococcus coralloides DSM 2259 chromosome, complete genomeLysR family transcriptional regulator1e-1377.4
NC_015583:4879:216162161622509894Novosphingobium sp. PP1Y plasmid Mpl, complete sequenceLysR family transcriptional regulator2e-1377
NC_013446:3147202:317430431743043175206903Comamonas testosteroni CNB-2, complete genometranscriptional regulator, LysR family3e-1376.3
NC_014306:3210311:321398632139863214903918Erwinia billingiae Eb661, complete genomeTranscriptional regulator, LysR family4e-1375.9
NC_014966:1668822:167757116775711678437867Vibrio vulnificus MO6-24/O chromosome II, complete sequenceLysR family transcripitonal regulator7e-1375.1
NC_008699:2294361:230129423012942302250957Nocardioides sp. JS614, complete genomeLysR, substrate-binding1e-1273.9
NC_007626:697926:713495713495714388894Magnetospirillum magneticum AMB-1, complete genomeTranscriptional regulator2e-1273.6
NC_017030:7557295:757641075764107577321912Corallococcus coralloides DSM 2259 chromosome, complete genomeLysR family transcriptional regulator4e-1272.4
NC_006361:3047788:305297930529793053896918Nocardia farcinica IFM 10152, complete genomeputative transcriptional regulator5e-1272.4
NC_009053:895965:909512909512910399888Actinobacillus pleuropneumoniae L20, complete genometranscriptional regulatory protein8e-1271.6
NC_020911:1859210:187856918785691879453885Octadecabacter antarcticus 307, complete genomeLysR family transcriptional regulator9e-1271.2
NC_020209:2838582:285848428584842859365882Pseudomonas poae RE*1-1-14, complete genomeLysR family transcriptional regulator2e-1170.5
NC_010278:860165:872996872996873883888Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,transcriptional regulator2e-1170.1
NC_009778:1222273:124138612413861242297912Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein2e-1170.1
NC_020260:1293860:131801713180171318928912Cronobacter sakazakii Sp291, complete genomehypothetical protein2e-1170.1
NC_013960:1587761:163993216399321640849918Nitrosococcus halophilus Nc4 chromosome, complete genomeLysR substrate-binding protein6e-1168.6
NC_011000:183928:207582207582208505924Burkholderia cenocepacia J2315 chromosome 1, complete sequenceLysR family regulatory protein7e-1168.2
NC_010557:679656:6959636959636971951233Burkholderia ambifaria MC40-6 chromosome 3, complete sequencetranscriptional regulator, MarR family8e-1168.2
NC_014541:4167916:417125541712554172199945Ferrimonas balearica DSM 9799 chromosome, complete genometranscriptional regulator, LysR family9e-1167.8
NC_014540:2828299:282924028292402830205966Burkholderia sp. CCGE1003 chromosome 2, complete sequenceLysR family transcriptional regulator2e-1067.4
NC_016628:1190366:120946812094681210349882Vibrio furnissii NCTC 11218 chromosome 2, complete sequencetranscriptional regulator, LysR family protein2e-1067.4
NC_015677:285896:308759308759309706948Ramlibacter tataouinensis TTB310 chromosome, complete genomeLysR family transcriptional regulator1e-1067.4
NC_008322:373531:376102376102376998897Shewanella sp. MR-7, complete genometranscriptional regulator, LysR family2e-1067
NC_009832:5369566:538588253858825386775894Serratia proteamaculans 568, complete genometranscriptional regulator, LysR family2e-1066.6
NC_017047:2079368:208807320880732088990918Rahnella aquatilis HX2 chromosome, complete genomeLysR family transcriptional regulator4e-1065.9
NC_010501:2609567:263825026382502639170921Pseudomonas putida W619, complete genometranscriptional regulator, LysR family4e-1065.9
NC_008313:959638:982142982142983050909Ralstonia eutropha H16 chromosome 1, complete sequencetranscriptional regulator, LysR-family5e-1065.5
NC_007650:2901751:1250812508135151008Burkholderia thailandensis E264 chromosome II, complete sequencetranscriptional regulator, LysR family6e-1065.1
NC_010172:3894652:390488939048893905812924Methylobacterium extorquens PA1, complete genomeLysR substrate-binding8e-1064.7
NC_012988:4262631:427395042739504274873924Methylobacterium extorquens DM4, complete genomeLysR family transcriptional regulator1e-0964.3
NC_015563:4024450:402698740269874027901915Delftia sp. Cs1-4 chromosome, complete genomeLysR family transcriptional regulator1e-0963.9
NC_010552:1212000:121205612120561212973918Burkholderia ambifaria MC40-6 chromosome 2, complete sequencetranscriptional regulator, MarR family1e-0963.9
NC_015379:4282815:428281542828154283708894Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative Transcription factor, LysR family2e-0963.2
NC_013282:646569:650613650613651530918Cronobacter turicensis, complete genomehypothetical protein2e-0963.2
NC_009937:311242:328489328489329448960Azorhizobium caulinodans ORS 571, complete genomeputative transcriptional regulator3e-0963.2
NC_009778:3287693:330055033005503301467918Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein3e-0962.8
NC_011002:564654:572009572009572965957Burkholderia cenocepacia J2315 chromosome 3, complete sequenceLysR family regulatory protein4e-0962.8
NC_009092:3682413:368507836850783685959882Shewanella loihica PV-4, complete genometranscriptional regulator, LysR family5e-0962.4
NC_009656:1994392:203544420354442036364921Pseudomonas aeruginosa PA7 chromosome, complete genomeputative transcriptional regulator5e-0962.4
NC_015976:2187377:220236222023622203273912Sphingobium sp. SYK-6, complete genomeLysR family transcriptional regulator5e-0962.4
NC_007963:1370903:138380013838001384696897Chromohalobacter salexigens DSM 3043, complete genometranscriptional regulator, LysR family5e-0962.4
NC_010681:221416:240736240736241665930Burkholderia phytofirmans PsJN chromosome 1, complete sequencetranscriptional regulator, LysR family4e-0962.4
NC_020260:3277007:329164432916443292561918Cronobacter sakazakii Sp291, complete genomeLysR-family transcriptional activator4e-0962.4
NC_004578:1719849:171984917198491720745897Pseudomonas syringae pv. tomato str. DC3000, complete genometranscriptional regulator, LysR family4e-0962.4
NC_009078:3087759:110541105411971918Burkholderia pseudomallei 1106a chromosome II, complete sequencetranscriptional regulator, LysR family6e-0962
NC_006349:2311817:121751217513092918Burkholderia mallei ATCC 23344 chromosome 2, complete sequencetranscriptional regulator, LysR family6e-0962
NC_006351:3159630:110281102811945918Burkholderia pseudomallei K96243 chromosome 2, complete sequenceLysR-family regulatory protein6e-0962
NC_009079:2339756:121751217513092918Burkholderia mallei NCTC 10247 chromosome I, complete sequencetranscriptional regulator, LysR family6e-0962
NC_016626:1781956:178195617819561782873918Burkholderia sp. YI23 plasmid byi_1p, complete sequenceLysR family transcriptional regulator6e-0962
NC_014623:6509000:652761265276126528526915Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeLysR family transcriptional regulator7e-0961.6
NC_009075:3113393:111171111712034918Burkholderia pseudomallei 668 chromosome II, complete sequenceputative HTH-type transcriptional regulator YeaT7e-0961.6
NC_020126:7015976:701765870176587018548891Myxococcus stipitatus DSM 14675, complete genomeLysR family transcriptional regulator9e-0961.2
NC_008343:2050000:207432820743282075227900Granulibacter bethesdensis CGDNIH1, complete genometranscriptional regulators, LysR family1e-0861.2
NC_012721:2556160:260201626020162602933918Burkholderia glumae BGR1 chromosome 2, complete genomeTranscriptional regulator, LysR family protein1e-0860.8
NC_013446:4281250:430675043067504307625876Comamonas testosteroni CNB-2, complete genometranscriptional regulator, LysR family1e-0860.8
NC_015856:3536441:354130235413023542297996Collimonas fungivorans Ter331 chromosome, complete genomeputative transcription regulator protein1e-0860.8
NC_010002:3465509:348123534812353482224990Delftia acidovorans SPH-1, complete genometranscriptional regulator, LysR family1e-0860.8
NC_014258:42262:629526295263854903Pantoea vagans C9-1 plasmid pPag3, complete sequenceHTH-type transcriptional activator AmpR2e-0860.5
NC_009659:1024201:104692510469251047869945Janthinobacterium sp. Marseille chromosome, complete genomeLysR family transcriptional regulator2e-0860.5
NC_011894:3029964:306921330692133070133921Methylobacterium nodulans ORS 2060, complete genometranscriptional regulator, LysR family2e-0860.5
NC_007510:1921251:193798019379801938882903Burkholderia sp. 383 chromosome 1, complete sequencetranscriptional regulator, LysR family2e-0860.5
NC_007963:3113739:312937531293753130250876Chromohalobacter salexigens DSM 3043, complete genometranscriptional regulator, LysR family2e-0860.5
NC_010725:4618000:462341446234144624382969Methylobacterium populi BJ001, complete genometranscriptional regulator, LysR family2e-0860.5
NC_015711:7905360:790987079098707910784915Myxococcus fulvus HW-1 chromosome, complete genomeLysR family transcriptional regulator2e-0860.1
NC_005773:4539751:455518245551824556168987Pseudomonas syringae pv. phaseolicola 1448A, complete genomeprobable transcriptional regulator, LysR family3e-0859.7
NC_008260:125500:125579125579126451873Alcanivorax borkumensis SK2, complete genometranscriptional regulator, LysR family3e-0859.7
NC_020064:1409596:144286014428601443744885Serratia marcescens FGI94, complete genometranscriptional regulator4e-0859.3
NC_014012:1097938:111464711146471115525879Shewanella violacea DSS12, complete genometranscriptional regulator, LysR family4e-0859.3
NC_016830:2247789:227305122730512273935885Pseudomonas fluorescens F113 chromosome, complete genomeLysR family transcriptional regulator4e-0859.3
NC_008061:2773670:164116412561921Burkholderia cenocepacia AU 1054 chromosome 2, complete sequencetranscriptional regulator, LysR family4e-0859.3
NC_008543:2474002:247598824759882476908921Burkholderia cenocepacia HI2424 chromosome 2, complete sequencetranscriptional regulator, LysR family4e-0859.3
NC_015733:715947:741930741930742820891Pseudomonas putida S16 chromosome, complete genometranscriptional regulator3e-0859.3
NC_010508:1980689:200353920035392004489951Burkholderia cenocepacia MC0-3 chromosome 1, complete sequencetranscriptional regulator, LysR family3e-0859.3
NC_010515:1900967:191739719173971918317921Burkholderia cenocepacia MC0-3 chromosome 2, complete sequencetranscriptional regulator, LysR family3e-0859.3
NC_009656:44500:654596545966379921Pseudomonas aeruginosa PA7 chromosome, complete genomeputative transcriptional regulator5e-0858.9
NC_011894:6516856:652475965247596525673915Methylobacterium nodulans ORS 2060, complete genometranscriptional regulator, LysR family4e-0858.9
NC_015379:4630367:463611246361124636993882Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative Transcription factor, LysR family4e-0858.9
NC_014540:1835493:185607418560741856991918Burkholderia sp. CCGE1003 chromosome 2, complete sequenceLysR family transcriptional regulator7e-0858.5
NC_009997:415808:427983427983428882900Shewanella baltica OS195, complete genometranscriptional regulator, LysR family6e-0858.5
NC_015856:439795:461203461203462090888Collimonas fungivorans Ter331 chromosome, complete genomeputative transcriptional regulator6e-0858.5
NC_016901:414670:426845426845427744900Shewanella baltica OS678 chromosome, complete genomeLysR family transcriptional regulator6e-0858.5
NC_016612:2902628:290910129091012910009909Klebsiella oxytoca KCTC 1686 chromosome, complete genomeputative LysR-family transcriptional regulator6e-0858.5
NC_012808:1122341:115155711515571152501945Methylobacterium extorquens AM1, complete genomeTranscriptional regulator, LysR family6e-0858.5
CP002516:3863932:388055138805513881465915Escherichia coli KO11, complete genometranscriptional regulator, LysR family6e-0858.5
NC_016902:3863932:388055138805513881465915Escherichia coli KO11FL chromosome, complete genomeLysR family transcriptional regulator6e-0858.5
NC_016745:1548426:155274415527441553673930Oceanimonas sp. GK1 chromosome, complete genomeLysR family transcriptional regulator6e-0858.5
NC_015968:2195645:222400822240082224877870Enterobacter asburiae LF7a chromosome, complete genomeLysR family transcriptional regulator9e-0858.2
NC_016830:3697173:3707838370783837088391002Pseudomonas fluorescens F113 chromosome, complete genomeLysR family transcriptional regulator8e-0858.2
NC_007484:2746078:275752927575292758506978Nitrosococcus oceani ATCC 19707, complete genometranscriptional regulatory protein, LysR family8e-0858.2
NC_009997:2967521:298667129866712987549879Shewanella baltica OS195, complete genometranscriptional regulator, LysR family8e-0858.2
NC_016901:2916988:293613829361382937016879Shewanella baltica OS678 chromosome, complete genomeLysR family transcriptional regulator8e-0858.2
NC_009512:3068495:308259830825983083479882Pseudomonas putida F1, complete genometranscriptional regulator, LysR family8e-0858.2
NC_010804:1334581:135100713510071351909903Burkholderia multivorans ATCC 17616 chromosome 1, completeLysR family transcriptional regulator8e-0858.2
NC_015138:5342473:536134853613485362280933Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeLysR family transcriptional regulator8e-0858.2
NC_010084:2171881:217286421728642173787924Burkholderia multivorans ATCC 17616 chromosome 1, completeLysR family transcriptional regulator8e-0858.2
NC_007511:3103999:310828631082863109242957Burkholderia sp. 383 chromosome 2, complete sequencetranscriptional regulator, LysR family7e-0858.2
NC_015186:2165628:218134321813432182242900Acidiphilium multivorum AIU301, complete genomeLysR family transcriptional regulator1e-0757.8
NC_007348:752692:764519764519765430912Ralstonia eutropha JMP134 chromosome 2, complete sequenceregulatory protein, LysR:LysR, substrate-binding1e-0757.8
NC_011071:2207385:220881222088122209705894Stenotrophomonas maltophilia R551-3, complete genometranscriptional regulator, LysR family1e-0757.4
NC_012856:1080000:108545910854591086370912Ralstonia pickettii 12D chromosome 1, complete genometranscriptional regulator, LysR family1e-0757.4
NC_010505:4990472:499417649941764995042867Methylobacterium radiotolerans JCM 2831, complete genometranscriptional regulator, LysR family2e-0757.4
NC_015379:3175500:318748831874883188384897Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Putative transcriptional regulator protein, LysR family2e-0757
NC_009901:4216206:421909842190984220069972Shewanella pealeana ATCC 700345, complete genometranscriptional regulator, LysR family2e-0757
NC_011206:2447905:245745224574522458375924Acidithiobacillus ferrooxidans ATCC 53993, complete genometranscriptional regulator, LysR family2e-0757
NC_011761:2546081:255562825556282556551924Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completeLysR family transcriptional regulator2e-0757
NC_013960:1778411:179962817996281800575948Nitrosococcus halophilus Nc4 chromosome, complete genomeLysR substrate-binding protein2e-0757
NC_015410:3003417:301054430105443011431888Pseudomonas mendocina NK-01 chromosome, complete genomeLysR family transcriptional regulator2e-0757
NC_009439:1297851:130276813027681303706939Pseudomonas mendocina ymp, complete genomeLysR family transcriptional regulator2e-0757
NC_007948:517893:523953523953524864912Polaromonas sp. JS666, complete genometranscriptional regulator, LysR family2e-0757
NC_007508:4476726:448055344805534481476924Xanthomonas campestris pv. vesicatoria str. 85-10, complete genometranscriptional regulator, LysR family2e-0756.6
NC_014840:205723:247196247196248083888Pantoea sp. At-9b plasmid pPAT9B03, complete sequencetranscriptional regulator, LysR family2e-0756.6
NC_014640:2693060:270908427090842709998915Achromobacter xylosoxidans A8 chromosome, complete genomeLysR family transcriptional regulator2e-0756.6
NC_008752:415599:440503440503441480978Acidovorax avenae subsp. citrulli AAC00-1, complete genometranscriptional regulator, LysR family2e-0756.6
NC_014623:9492000:949901294990129499953942Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeLysR family transcriptional regulator2e-0756.6
NC_008781:1426285:142963214296321430534903Polaromonas naphthalenivorans CJ2, complete genometranscriptional regulator, LysR family2e-0756.6
NC_020453:1881904:188636618863661887301936Agromonas oligotrophica S58 DNA, complete genometranscriptional regulator, LysR family3e-0756.2
NC_003296:556836:559788559788560666879Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePROBABLE TRANSCRIPTION REGULATOR PROTEIN3e-0756.2
NC_016887:5295120:535758653575865358506921Nocardia cyriacigeorgica GUH-2, complete genomeputative transcriptional regulator3e-0756.2
NC_015138:3022414:303057630305763031550975Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeLysR family transcriptional regulator4e-0755.8
NC_011365:1865687:189134518913451892262918Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeLysR family transcriptional regulator4e-0755.8
NC_005966:2653945:267257826725782673465888Acinetobacter sp. ADP1, complete genomeputative transcriptional regulator4e-0755.8
NC_013421:1545386:155997915599791560881903Pectobacterium wasabiae WPP163, complete genometranscriptional regulator, LysR family4e-0755.8
NC_007492:2771021:2789206278920627902191014Pseudomonas fluorescens PfO-1, complete genomeTranscriptional Regulator, LysR family6e-0755.5
NC_010676:3009980:301155930115593012446888Burkholderia phytofirmans PsJN chromosome 2, complete sequencetranscriptional regulator, LysR family5e-0755.5
NC_015566:69190:898538985390764912Serratia sp. AS12 chromosome, complete genomeLysR family transcriptional regulator8e-0755.1
NC_015567:69190:898538985390764912Serratia sp. AS9 chromosome, complete genomeLysR family transcriptional regulator8e-0755.1
NC_010552:2454776:246529224652922466242951Burkholderia ambifaria MC40-6 chromosome 2, complete sequencetranscriptional regulator, LysR family8e-0755.1
NC_007778:5079500:509655250965525097478927Rhodopseudomonas palustris HaA2, complete genometranscriptional regulator, LysR family7e-0755.1
NC_009438:2058566:206876720687672069660894Shewanella putrefaciens CN-32 chromosome, complete genomeLysR family transcriptional regulator7e-0755.1
NC_010511:2163570:218561221856122186535924Methylobacterium sp. 4-46 chromosome, complete genomeLysR family transcriptional regulator7e-0755.1
NC_017033:2758582:277009327700932770992900Frateuria aurantia DSM 6220 chromosome, complete genometranscriptional regulator7e-0755.1
NC_008781:1426285:144967914496791450593915Polaromonas naphthalenivorans CJ2, complete genometranscriptional regulator, LysR family6e-0755.1
NC_013283:113660:136421364214583942Cronobacter turicensis plasmid pCTU1, complete sequencehypothetical protein6e-0755.1
NC_014931:2511423:252473025247302525635906Variovorax paradoxus EPS chromosome, complete genometranscriptional regulator, LysR family6e-0755.1
NC_008543:61000:626926269263609918Burkholderia cenocepacia HI2424 chromosome 2, complete sequencetranscriptional regulator, LysR family1e-0654.7
NC_008061:2193000:220470822047082205625918Burkholderia cenocepacia AU 1054 chromosome 2, complete sequencetranscriptional regulator, LysR family1e-0654.7
NC_009439:442890:484747484747485631885Pseudomonas mendocina ymp, complete genomeLysR family transcriptional regulator1e-0654.7
NC_007925:3911323:392111039211103922084975Rhodopseudomonas palustris BisB18, complete genometranscriptional regulator, LysR family1e-0654.7
NC_021150:1627347:163260616326061633481876Azotobacter vinelandii CA6, complete genometranscriptional regulator, LysR family9e-0754.7
NC_012560:1627334:163259316325931633468876Azotobacter vinelandii DJ, complete genometranscriptional regulator, LysR family9e-0754.7
NC_015727:1357095:137732713773271378205879Cupriavidus necator N-1 plasmid BB1p, complete sequencetranscriptional regulator protein8e-0754.7
NC_016514:1701273:170127317012731702178906Enterobacter cloacae EcWSU1 chromosome, complete genomehypothetical protein1e-0654.3
NC_020126:2216926:222336322233632224265903Myxococcus stipitatus DSM 14675, complete genomeLysR family transcriptional regulator1e-0654.3
NC_016027:229180:249849249849250769921Gluconacetobacter xylinus NBRC 3288, complete genomeLysR family transcriptional regulator1e-0654.3
NC_009512:1025365:103953610395361040516981Pseudomonas putida F1, complete genometranscriptional regulator, LysR family1e-0654.3
NC_015968:1709680:171134917113491712254906Enterobacter asburiae LF7a chromosome, complete genomeLysR family transcriptional regulator1e-0654.3
NC_012988:1459961:146711014671101468039930Methylobacterium extorquens DM4, complete genometranscriptional regulator1e-0654.3
NC_010125:1651687:165302916530291653925897Gluconacetobacter diazotrophicus PAl 5, complete genometranscriptional regulator, LysR family1e-0654.3
NC_014118:1528851:154451915445191545472954Burkholderia sp. CCGE1002 chromosome chromosome 2, completetranscriptional regulator, LysR family2e-0653.9
NC_014311:1545175:155104715510471551979933Ralstonia solanacearum PSI07 chromosome, complete genomeLysR family transcriptional regulator2e-0653.9
NC_020209:47504:895488954890459912Pseudomonas poae RE*1-1-14, complete genomeLysR family transcriptional regulator2e-0653.9
NC_015410:2838132:284320628432062844156951Pseudomonas mendocina NK-01 chromosome, complete genomeLysR family transcriptional regulator2e-0653.9
NC_016628:935420:958929958929959843915Vibrio furnissii NCTC 11218 chromosome 2, complete sequencetranscriptional regulator2e-0653.9
NC_014500:2688095:271127227112722712162891Dickeya dadantii 3937 chromosome, complete genomeputative lysR-family transcriptional regulator2e-0653.9
NC_015723:589727:594295594295595212918Cupriavidus necator N-1 chromosome 2, complete sequenceLysR family transcriptional regulator1e-0653.9
NC_013929:4927380:494002549400254940915891Streptomyces scabiei 87.22 chromosome, complete genomeLysR family transcriptional regulator2e-0653.5
NC_008702:1432952:145019714501971451132936Azoarcus sp. BH72, complete genomeputative HTH-type transcriptional regulator cbl2e-0653.5
NC_012491:6143928:616137461613746162246873Brevibacillus brevis NBRC 100599, complete genometranscriptional regulator2e-0653.5
NC_020064:3157656:317487131748713175794924Serratia marcescens FGI94, complete genometranscriptional regulator2e-0653.5
NC_007005:5825925:583655158365515837453903Pseudomonas syringae pv. syringae B728a, complete genomeregulatory protein, LysR:LysR, substrate-binding2e-0653.5
NC_012791:721813:734651734651735598948Variovorax paradoxus S110 chromosome 1, complete genometranscriptional regulator, LysR family2e-0653.5
NC_016845:4539381:456487445648744565785912Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,LysR family transcriptional regulator2e-0653.5
NC_007778:5079500:509166050916605092574915Rhodopseudomonas palustris HaA2, complete genometranscriptional regulator, LysR family2e-0653.5
NC_013457:140474:149875149875150714840Vibrio sp. Ex25 chromosome 2, complete genometranscriptional regulator2e-0653.5
NC_009439:3535152:354618435461843547113930Pseudomonas mendocina ymp, complete genomeLysR family transcriptional regulator2e-0653.5
NC_011750:2585015:259848425984842599437954Escherichia coli IAI39 chromosome, complete genomeDNA-binding transcriptional regulator DsdC3e-0653.1
NC_015276:855150:859769859769860695927Marinomonas mediterranea MMB-1 chromosome, complete genometranscriptional regulator, LysR family3e-0653.1
NC_014500:2019113:202921820292182030132915Dickeya dadantii 3937 chromosome, complete genomeLysR family transcriptional regulator3e-0653.1
NC_010498:2555706:256750225675022568449948Escherichia coli SMS-3-5, complete genomeD-serine deaminase transcriptional activator3e-0653.1
NC_015376:3320818:333322733332273334138912Burkholderia gladioli BSR3 chromosome chromosome 2, completetranscriptional regulator3e-0653.1
NC_009659:997779:101532510153251016242918Janthinobacterium sp. Marseille chromosome, complete genomeLysR family transcriptional regulator3e-0653.1
NC_014834:959986:967016967016967912897Rhodopseudomonas palustris DX-1 chromosome, complete genomeLysR family transcriptional regulator3e-0653.1
NC_010676:2621496:262535126253512626265915Burkholderia phytofirmans PsJN chromosome 2, complete sequencetranscriptional regulator, LysR family3e-0653.1
NC_016745:1719800:173545917354591736394936Oceanimonas sp. GK1 chromosome, complete genomeLysR family transcriptional regulator3e-0653.1
NC_009439:2337024:235296223529622353957996Pseudomonas mendocina ymp, complete genomeLysR family transcriptional regulator3e-0653.1
NC_015947:223184:238003238003238914912Burkholderia sp. JV3 chromosome, complete genomeLysR family transcriptional regulator2e-0653.1
NC_011750:4390000:439002343900234390973951Escherichia coli IAI39 chromosome, complete genomeDNA-binding transcriptional regulator DsdC2e-0653.1
NC_014029:2756500:275829027582902759231942Yersinia pestis Z176003 chromosome, complete genomeLysR family transcriptional regulator4e-0652.8
NC_017154:2804000:280544028054402806381942Yersinia pestis D106004 chromosome, complete genomeLysR family transcriptional regulator4e-0652.8
NC_017160:2787637:280267528026752803616942Yersinia pestis D182038 chromosome, complete genomeputative LlysR-family transcriptional regulatory protein4e-0652.8
NC_017168:2941938:295552829555282956469942Yersinia pestis A1122 chromosome, complete genomeLysR family transcriptional regulator4e-0652.8
NC_017265:1571305:158634315863431587284942Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,LysR family transcriptional regulator4e-0652.8
NC_002516:2306776:232633423263342327287954Pseudomonas aeruginosa PAO1, complete genomeprobable transcriptional regulator4e-0652.8
NC_009708:1735903:175320517532051754146942Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeLysR family substrate binding transcriptional regulator4e-0652.8
NC_009381:2138625:215817421581742159115942Yersinia pestis Pestoides F chromosome, complete genomeLlysR family transcriptional regulatory protein4e-0652.8
NC_005810:2549680:257202125720212572962942Yersinia pestis biovar Microtus str. 91001, complete genomeLysR family transcriptional regulator4e-0652.8
NC_008149:2366500:236775123677512368692942Yersinia pestis Nepal516, complete genomeputativeLlysR-family transcriptional regulatory protein4e-0652.8
NC_010159:1818500:182000518200051820946942Yersinia pestis Angola, complete genomesubstrate-binding transcriptional regulator, LysR family4e-0652.8
NC_004088:1851500:186526218652621866203942Yersinia pestis KIM, complete genometranscriptional regulator LYSR-type4e-0652.8
NC_003143:2804500:280596728059672806908942Yersinia pestis CO92, complete genomeputativeLlysR-family transcriptional regulatory protein4e-0652.8
NC_011742:2533500:253359425335942534529936Escherichia coli S88 chromosome, complete genomeDNA-binding transcriptional regulator DsdC4e-0652.8
NC_008563:2610499:261049926104992611434936Escherichia coli APEC O1, complete genomeD-serine deaminase activator4e-0652.8
NC_013854:1686997:168699716869971687899903Azospirillum sp. B510, complete genometranscriptional regulator4e-0652.8
NC_008825:2564965:257791925779192578890972Methylibium petroleiphilum PM1, complete genomeputative transcriptional regulator4e-0652.8
NC_012967:2409500:241092124109212411856936Escherichia coli B str. REL606 chromosome, complete genomeDNA-binding transcriptional regulator DsdC3e-0652.8
NC_012759:2342986:236052123605212361456936Escherichia coli BW2952 chromosome, complete genomeDNA-binding transcriptional regulator DsdC3e-0652.8
NC_000913:2455037:247471624747162475651936Escherichia coli K12, complete genomeDNA-binding transcriptional dual regulator3e-0652.8
AC_000091:2462461:248214024821402483075936Escherichia coli W3110 DNA, complete genomeDNA-binding transcriptional dual regulator3e-0652.8
NC_016010:1822212:1826123182612318271241002Xanthomonas axonopodis pv. citrumelo F1 chromosome, completeLysR family transcriptional regulator3e-0652.8
NC_004431:2747237:275907027590702760023954Escherichia coli CFT073, complete genomeD-serine deaminase activator3e-0652.8
NC_010473:2548946:256648125664812567416936Escherichia coli str. K-12 substr. DH10B, complete genomeDNA-binding transcriptional dual regulator3e-0652.8
NC_009800:2505872:250809925080992509034936Escherichia coli HS, complete genomeD-serine deaminase transcriptional activator3e-0652.8
NC_007802:3807500:382500938250093825923915Jannaschia sp. CCS1, complete genometranscriptional regulator, LysR family3e-0652.8
NC_008314:477722:484465484465485355891Ralstonia eutropha H16 chromosome 2, complete sequencetranscriptional regulator, LysR-family4e-0652.8
NC_008095:7563441:757489075748907575720831Myxococcus xanthus DK 1622, complete genometranscriptional regulator, LysR family4e-0652.8
NC_016002:2825017:284759028475902848543954Pseudogulbenkiania sp. NH8B, complete genomeLysR family transcriptional regulator3e-0652.8
NC_012912:2800884:280584128058412806743903Dickeya zeae Ech1591, complete genometranscriptional regulator, LysR family3e-0652.8
NC_010125:1011430:102005210200521020969918Gluconacetobacter diazotrophicus PAl 5, complete genomeputative transcriptional regulator, LysR family3e-0652.8
NC_014310:1130344:113544611354461136363918Ralstonia solanacearum PSI07 megaplasmid, complete sequenceLysR family transcriptional regulator3e-0652.8
CP002797:2472908:247931124793112480246936Escherichia coli NA114, complete genomeD-serine deaminase activator protein5e-0652.4
NC_010002:5691968:569774056977405698654915Delftia acidovorans SPH-1, complete genometranscriptional regulator, LysR family4e-0652.4
NC_011001:854713:869801869801870748948Burkholderia cenocepacia J2315 chromosome 2, complete sequenceLysR family regulatory protein4e-0652.4
NC_009648:3720000:373646137364613737372912Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeLysR family transcriptional regulator4e-0652.4
NC_010524:4644587:466507146650714666003933Leptothrix cholodnii SP-6, complete genometranscriptional regulator, LysR family4e-0652.4
NC_020181:421941:428413428413429303891Enterobacter aerogenes EA1509E, complete genomeGlycine cleavage system transcriptional activator4e-0652.4
NC_008345:2717945:272026527202652721134870Shewanella frigidimarina NCIMB 400, complete genometranscriptional regulator, LysR family protein4e-0652.4
NC_007946:2625461:263796226379622638903942Escherichia coli UTI89, complete genomeD-serine deaminase activator4e-0652.4
NC_011745:2751437:275143727514372752372936Escherichia coli ED1a chromosome, complete genomeDNA-binding transcriptional regulator DsdC4e-0652.4
NC_016616:2112211:2139101213910121401081008Dechlorosoma suillum PS chromosome, complete genometranscriptional regulator4e-0652.4
NC_008543:2220698:2249398224939822505401143Burkholderia cenocepacia HI2424 chromosome 2, complete sequencetranscriptional regulator, LysR family6e-0652
NC_002927:1292573:129669812966981297651954Bordetella bronchiseptica RB50, complete genomeLysR-family transcriptional regulator6e-0652
NC_003295:659837:681073681073682029957Ralstonia solanacearum GMI1000, complete genomePROBABLE TRANSCRIPTION REGULATOR PROTEIN6e-0652
NC_007510:1959883:197138019713801972306927Burkholderia sp. 383 chromosome 1, complete sequencetranscriptional regulator, LysR family6e-0652
NC_021066:1712905:172925217292521730163912Raoultella ornithinolytica B6, complete genomeHTH-type transcriptional activator ttdR6e-0652
NC_009717:271385:2770072770072781341128Xanthobacter autotrophicus Py2 plasmid pXAUT01, complete sequenceLysR family transcriptional regulator7e-0652
NC_016830:3697173:374121537412153742141927Pseudomonas fluorescens F113 chromosome, complete genometranscriptional regulator7e-0652
NC_018691:3525430:357490235749023575789888Alcanivorax dieselolei B5 chromosome, complete genometranscriptional regulator, LysR family protein7e-0652
NC_015566:4547702:455487845548784555789912Serratia sp. AS12 chromosome, complete genomeLysR family transcriptional regulator6e-0652
NC_008391:111217:124976124976125899924Burkholderia cepacia AMMD chromosome 2, complete sequencetranscriptional regulator, LysR family6e-0652
NC_010678:900389:930187930187931086900Ralstonia pickettii 12J chromosome 2, complete sequencetranscriptional regulator, LysR family5e-0652
NC_012857:41946:717447174472643900Ralstonia pickettii 12D chromosome 2, complete genometranscriptional regulator, LysR family5e-0652
NC_014562:1402863:140504614050461405969924Pantoea vagans C9-1 chromosome, complete genomeUncharacterized HTH-type transcriptional regulator yhjC5e-0652
NC_012560:3200961:320436532043653205294930Azotobacter vinelandii DJ, complete genomeTranscriptional regulator LysR family protein5e-0652
NC_021150:3200959:320436332043633205292930Azotobacter vinelandii CA6, complete genomeTranscriptional regulator LysR family protein5e-0652
NC_016027:2580477:258593125859312586848918Gluconacetobacter xylinus NBRC 3288, complete genomeLysR family transcriptional regulator5e-0652
NC_008391:2045348:205021420502142051122909Burkholderia cepacia AMMD chromosome 2, complete sequencetranscriptional regulator, LysR family5e-0652
NC_013854:2714033:271403327140332714995963Azospirillum sp. B510, complete genometranscriptional regulator5e-0652
NC_007492:6372900:637796663779666378892927Pseudomonas fluorescens PfO-1, complete genomeTranscriptional Regulator, LysR family8e-0651.6
NC_014839:12519:193801938020285906Pantoea sp. At-9b plasmid pPAT9B02, complete sequencetranscriptional regulator, LysR family8e-0651.6
NC_011992:863174:876875876875877807933Acidovorax ebreus TPSY, complete genometranscriptional regulator, LysR family8e-0651.6
NC_009079:705931:717865717865718857993Burkholderia mallei NCTC 10247 chromosome I, complete sequencetranscriptional regulator, LysR family8e-0651.6
NC_015137:2616222:267162126716212672583963Burkholderia sp. CCGE1001 chromosome 2, complete sequenceLysR family transcriptional regulator8e-0651.6
NC_018691:3082000:308210430821043083027924Alcanivorax dieselolei B5 chromosome, complete genomeputative LysR-family transcriptional regulator8e-0651.6
NC_017030:5785681:580535458053545806253900Corallococcus coralloides DSM 2259 chromosome, complete genomeLysR family transcriptional regulator8e-0651.6
NC_014618:2989000:299040629904062991323918Enterobacter cloacae SCF1 chromosome, complete genomeLysR family transcriptional regulator7e-0651.6
NC_005773:2641715:266283126628312663733903Pseudomonas syringae pv. phaseolicola 1448A, complete genometranscriptional regulator, LysR family7e-0651.6
NC_015379:2505233:253862225386222539527906Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative transcription factor, LysR family7e-0651.6
NC_014121:2629075:264768326476832648588906Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completetranscriptional regulator, LysR family7e-0651.6
NC_007761:1097531:111118911111891112082894Rhizobium etli CFN 42, complete genomeprobable transcriptional regulator protein, LysR family9e-0651.2