Pre_GI Gene

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Host: NC_012967 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012967:2409500 Escherichia coli B str. REL606 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli B str. REL606 is unable to use arabinose due to a mutation. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
24097432410675933putative inner membrane proteinQuickGO ontologyBLASTP
24109212411856936DNA-binding transcriptional regulator DsdCQuickGO ontologyBLASTP
241207424134111338permease DsdXQuickGO ontologyBLASTP
241342924147571329D-serine dehydrataseQuickGO ontologyBLASTP
241486524164031539putative multidrug efflux systemQuickGO ontologyBLASTP
241640324175661164EmrKY-TolC multidrug resistance efflux pump membrane fusion protein componentQuickGO ontologyBLASTP
24179822418596615DNA-binding transcriptional activator EvgAQuickGO ontologyBLASTP
241860124221943594hybrid sensory histidine kinase in two-component regulatory system with EvgAQuickGO ontologyBLASTP
242225024233951146hypothetical proteinBLASTP
24234692424413945putative transporter YfdVQuickGO ontologyBLASTP
242448324261771695putative oxalyl-CoA decarboxylaseQuickGO ontologyBLASTP
242623124274811251formyl-coenzyme A transferaseQuickGO ontologyBLASTP
24279942428626633hypothetical proteinBLASTP
24289222429197276putative lipoprotein involved in colanic acid biosynthesisQuickGO ontologyBLASTP
24292742429516243putative inner membrane proteinQuickGO ontologyBLASTP
24298692430789921lipid A biosynthesis palmitoleoyl acyltransferaseQuickGO ontologyBLASTP
243128124325191239aminotransferaseQuickGO ontologyBLASTP