Pre_GI Gene

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Host: NC_007005 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_007005:5825925 Pseudomonas syringae pv. syringae B728a, complete genome

Host Lineage: Pseudomonas syringae; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain is the causal agent of brown spot disease on beans. It was isolated from a snap bean leaflet in Wisconsin, USA. Plant pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
58252335825928696Amino acid ABC transporter permease protein 3-TM region HisGluGlnArgopineQuickGO ontologyBLASTP
58259255826614690Amino acid ABC transporter permease protein 3-TM region HisGluGlnArgopineQuickGO ontologyBLASTP
582661658278871272hypothetical proteinBLASTP
58281835828509327hypothetical proteinBLASTP
582895258299771026Heat shock protein DnaJ N-terminalQuickGO ontologyBLASTP
58313925831862471hypothetical proteinBLASTP
58332155833706492type III effector protein AvrPto1QuickGO ontologyBLASTP
58338245834417594conserved hypothetical bacteriophage proteinQuickGO ontologyBLASTP
58344185834795378unnamed protein product similar to bacteriophage proteinQuickGO ontologyBLASTP
58356865836432747short chain dehydrogenaseQuickGO ontologyBLASTP
58365515837453903regulatory protein LysRLysR substrate-bindingQuickGO ontologyBLASTP
583818058392651086Protein of unknown function DUF450QuickGO ontologyBLASTP
58394105840147738hypothetical proteinBLASTP
58401595840632474GCN5-related N-acetyltransferaseQuickGO ontologyBLASTP
58407275841323597ATP-dependent DNA helicase recGQuickGO ontologyBLASTP
58413675841954588hypothetical proteinBLASTP
58421215842591471hypothetical proteinBLASTP
584286358441371275outer membrane porinQuickGO ontologyBLASTP