Pre_GI Gene

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Host: NC_009512 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009512:1025365 Pseudomonas putida F1, complete genome

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from a polluted creek in Urbana, Illinois, USA by enrichment culture with ethylbenzyne as a sole source of carbon and energy. Its ability to degrade several different compounds including benzene, toluene, and ethylbenzene makes this species useful in the bioremediation of sites contaminated with multiple aromatic hydrocarbons. Underground gasoline tanks which have developed leaks can contaminate soil and water with a variety of these compounds. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
10253651026078714binding-protein-dependent transport systems inner membrane componentQuickGO ontologyBLASTP
102659410282191626peptide chain release factor 3QuickGO ontologyBLASTP
102835010294291080extracellular solute-binding protein family 1QuickGO ontologyBLASTP
10294821029823342protein of unknown function DUF861 cupin_3QuickGO ontologyBLASTP
102985710312631407FAD dependent oxidoreductaseQuickGO ontologyBLASTP
10313281032152825helix-turn-helix- domain containing protein AraC typeQuickGO ontologyBLASTP
10334301034179750hypothetical proteinBLASTP
10341981034656459Glyoxalasebleomycin resistance proteindioxygenaseQuickGO ontologyBLASTP
10346531035099447hypothetical proteinBLASTP
10351101035985876hypothetical proteinBLASTP
103598210372141233Biotin carboxylase-like proteinQuickGO ontologyBLASTP
103725510384961242sodiumhydrogen exchangerQuickGO ontologyBLASTP
10385721039441870protein of unknown function DUF6 transmembraneQuickGO ontology
10395361040516981transcriptional regulator LysR familyQuickGO ontologyBLASTP
10405191040698180Rubredoxin-type FeCys4 proteinQuickGO ontologyBLASTP
10411381042106969oligopeptidedipeptide ABC transporter ATPase subunitQuickGO ontologyBLASTP
10421061043074969oligopeptidedipeptide ABC transporter ATPase subunitQuickGO ontologyBLASTP
10430851044011927binding-protein-dependent transport systems inner membrane componentQuickGO ontologyBLASTP