Pre_GI Gene

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Host: NC_008260 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008260:125500 Alcanivorax borkumensis SK2, complete genome

Host Lineage: Alcanivorax borkumensis; Alcanivorax; Alcanivoracaceae; Oceanospirillales; Proteobacteria; Bacteria

General Information: This bacterium was isolated from a seawater sediment sample in the North Sea. The species is able to use Mihagol-S (C14,15-n-alkanes) as a principal carbon source. Using n-alkanes as a sole carbon source causes the strains to produce extracellular and membrane-bound surface-active glucose lipids. Phenotypic analysis showed a restricted nutritional profile, high halotolerance, the absence of fermentative metabolism, and a low G+C content. This, in combination with a 16S phylogenetic study, allowed the placing of this organism into a new genus.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
125579126451873transcriptional regulator LysR familyQuickGO ontologyBLASTP
127079127909831haloacid dehalogenase-like hydrolase putativeQuickGO ontologyBLASTP
1279471294161470amidaseQuickGO ontologyBLASTP
129582130286705transcriptional regulator GntR familyQuickGO ontologyBLASTP
1304081315561149alkane-1-monooxygenaseQuickGO ontologyBLASTP
1316441327441101fimbrial proteinQuickGO ontology
132741133475735type 1 pili chaperone protein FimCQuickGO ontologyBLASTP
1334511359132463type 1 pili subunit FimDQuickGO ontologyBLASTP
135969136514546Type-1 fimbrial protein A chain precursorQuickGO ontology
1369231383741452potassium uptake protein TrkH familyQuickGO ontologyBLASTP
1384861398621377potassium uptake proteinQuickGO ontologyBLASTP
1398591412021344tRNA and rRNA cytosine-C5-methylase putativeQuickGO ontologyBLASTP
141159142151993methionyl-tRNA formyltransferaseQuickGO ontologyBLASTP
142342142848507peptide deformylaseQuickGO ontologyBLASTP
1429941440671074LysM domain proteinQuickGO ontologyBLASTP
1441411452021062peptide deformylase DNA processing proteinQuickGO ontologyBLASTP