Pre_GI Gene

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Host: CP002516 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

CP002516:3863932 Escherichia coli KO11, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
386112838639352808type VI secretion ATPase ClpV1 familyQuickGO ontologyBLASTP
38639323864675744type VI secretion-associated protein VC_A0118 familyQuickGO ontologyBLASTP
386468038660921413type VI secretion-associated protein VC_A0119 familyQuickGO ontologyBLASTP
386611138696353525type VI secretion protein IcmFQuickGO ontologyBLASTP
386964638709981353ImpA domain proteinQuickGO ontologyBLASTP
38710223871504483type VI secretion system effector Hcp1 familyQuickGO ontologyBLASTP
38715483872462915hypothetical proteinBLASTP
38724723872951480hypothetical proteinBLASTP
38730883873873786putative aminopeptidaseQuickGO ontologyBLASTP
3874204387428077tRNA-AspQuickGO ontologyBLASTP
38744133875153741DNA polymerase III epsilon subunitQuickGO ontologyBLASTP
38752093875676468Ribonuclease HQuickGO ontologyBLASTP
38756733876395723Methyltransferase type 11QuickGO ontologyBLASTP
38764293877184756hydroxyacylglutathione hydrolaseQuickGO ontologyBLASTP
387725638786141359MLTD_N domain proteinQuickGO ontologyBLASTP
38786623879432771Methyltransferase type 11QuickGO ontologyBLASTP
38795103880289780EndonucleaseexonucleasephosphataseQuickGO ontologyBLASTP
38805513881465915transcriptional regulator LysR familyQuickGO ontologyBLASTP
38814623882265804aldoketo reductaseQuickGO ontologyBLASTP
3882428388250477tRNA-AspQuickGO ontologyBLASTP
388255938826741165S ribosomal RNAQuickGO ontologyBLASTP
38827693885670290223S ribosomal RNAQuickGO ontologyBLASTP
3885856388593176tRNA-AlaQuickGO ontologyBLASTP
3885974388605077tRNA-IleQuickGO ontologyBLASTP