Pre_GI Gene

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Host: NC_008563 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008563:2610499 Escherichia coli APEC O1, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (serovar O1) is an avian pathogenic strain and causes respiratory, blood, and enteric infections primarily in poultry. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
26104992611434936D-serine deaminase activatorQuickGO ontologyBLASTP
261165226129891338DsdX permeaseQuickGO ontologyBLASTP
261300726143351329D-serine dehydrataseQuickGO ontologyBLASTP
261444326159811539multidrug resistance protein YQuickGO ontologyBLASTP
261598126170361056EmrKY-TolC multidrug resistance efflux pump membrane fusion proteinQuickGO ontologyBLASTP
26175602618174615DNA-binding response regulator in two-component regulatory system with EvgSQuickGO ontologyBLASTP
261817926217723594sensor protein EvgS precursorQuickGO ontologyBLASTP
262182826229731146putative CoA-transferase NADP-bindingQuickGO ontologyBLASTP
26230472623991945putative transporter proteinQuickGO ontologyBLASTP
262406126257551695putative oxalyl-CoA decarboxylaseQuickGO ontologyBLASTP
262580926270591251formyl-coenzyme A transferaseQuickGO ontologyBLASTP
26275712628206636hypothetical proteinBLASTP
26285022628777276putative lipoprotein involved in colanic acid biosynthesisQuickGO ontologyBLASTP
26294492630369921lipid A biosynthesis palmitoleoyl acyltransferaseQuickGO ontologyBLASTP
263086126320991239putative aminotransferaseQuickGO ontologyBLASTP