Pre_GI Gene

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Host: NC_010498 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010498:2555706 Escherichia coli SMS-3-5, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli SMS-3-5 was isolated from a toxic-metal contaminated site, Shipyard Creek, Charleston, South Carolina, USA. This strain is highly resistant to a number of antibiotics. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
25557062556236531putative outer membrane proteinQuickGO ontologyBLASTP
255628425641977914outer membrane autotransporterQuickGO ontologyBLASTP
25642222564842621LuxR family transcriptional regulatorQuickGO ontologyBLASTP
25651602565789630type 1 fimbriae regulatory proteinQuickGO ontologyBLASTP
25665382567107570type 1 fimbriae regulatory proteinQuickGO ontologyBLASTP
25675022568449948D-serine deaminase transcriptional activatorQuickGO ontologyBLASTP
256866725700041338gluconateH symporter GntP family proteinQuickGO ontologyBLASTP
257003725713531317D-serine ammonia-lyaseQuickGO ontologyBLASTP
257145825729961539multidrug resistance protein YQuickGO ontologyBLASTP
257299625741591164drug resistance MFS transporter membrane fusion protein MFP subunit EmrKQuickGO ontologyBLASTP
25745752575189615positive transcription regulator EvgSQuickGO ontologyBLASTP
257540425787873384sensor histidine kinaseresponse regulator EvgSQuickGO ontologyBLASTP
257884325799881146L-carnitine dehydrataseQuickGO ontologyBLASTP
25800622581006945auxin efflux carrier family proteinQuickGO ontologyBLASTP