Pre_GI Gene

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Host: NC_012660 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012660:5242392 Pseudomonas fluorescens SBW25 chromosome, complete genome

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Isolated in 1989 from the leaf surface of a sugar beet plant grown at the University Farm, Wytham, Oxford, UK. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
52423925243156765histidine transport ATP-binding proteinQuickGO ontologyBLASTP
524318452442961113hypothetical proteinBLASTP
52442985244996699putative histidine transporter permeaseQuickGO ontologyBLASTP
52449935245682690putative histidine transporter permeaseQuickGO ontologyBLASTP
52457745246559786putative histidine-binding periplasmic proteinQuickGO ontologyBLASTP
524721152491661956acetyl-CoA synthetaseQuickGO ontologyBLASTP
52495805249849270hypothetical proteinBLASTP
525042552516751251ribonucleotide-diphosphate reductase subunit betaQuickGO ontologyBLASTP
525181452537571944hypothetical proteinBLASTP
52538595254026168putative insertion elementQuickGO ontology
52547365255449714putative 5-methylcytosine-specific restriction enzymeQuickGO ontologyBLASTP
52555105256166657hypothetical proteinBLASTP
52561925256599408hypothetical proteinBLASTP
52590555259420366hypothetical protein
525940452609061503putative amidaseQuickGO ontologyBLASTP
52610055261841837hypothetical protein
526192852629771050hypothetical proteinBLASTP
52631005263726627putative tetR family transcriptional regulatorQuickGO ontologyBLASTP
526391852649761059hypothetical proteinBLASTP
526524052665591320putative MCP-type signal transduction proteinQuickGO ontologyBLASTP
52666365267154519hypothetical proteinBLASTP
52671515268029879putative LysR family transcriptional regulatorQuickGO ontologyBLASTP