Pre_GI Gene

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Host: NC_011742 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011742:2533500 Escherichia coli S88 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli S88 is a serotype O45:K1 strain isolated from a case of neonatal meningitis. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
25335942534529936DNA-binding transcriptional regulator DsdCQuickGO ontologyBLASTP
253474725360841338permease DsdXQuickGO ontologyBLASTP
253610225374301329D-serine dehydrataseQuickGO ontologyBLASTP
253753825390761539multidrug efflux systemQuickGO ontologyBLASTP
253907625402391164EmrKY-TolC multidrug resistance efflux pump membrane fusion protein componentQuickGO ontologyBLASTP
25406552541269615DNA-binding transcriptional activator EvgAQuickGO ontologyBLASTP
254127425448673594hybrid sensory histidine kinase in two-component regulatory system with EvgAQuickGO ontologyBLASTP
254492325460681146hypothetical proteinBLASTP
25461422547086945transporter YfdVQuickGO ontologyBLASTP
254715625488501695oxalyl-CoA decarboxylaseQuickGO ontologyBLASTP
254890425501541251formyl-coenzyme A transferaseQuickGO ontologyBLASTP
25506662551301636hypothetical proteinBLASTP
25518482551994147hypothetical proteinBLASTP
25519492552191243hypothetical proteinBLASTP
25525442553464921lipid A biosynthesis palmitoleoyl acyltransferaseQuickGO ontologyBLASTP