Pre_GI: BLASTN Hits

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Query: NC_010067:892729 Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete

Start: 892729, End: 925238, Length: 32510

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This subspecies (IIIa) is usually found associated with reptiles, although contact with infected animals can result in the spread of the organism to humans or animals such as turkeys. This strain was originally isolated from a cornsnake in 1986 in Oregon, USA. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_011080:27224922722492274217119680Salmonella enterica subsp. enterica serovar Newport str. SL254,02252BLASTN svgBLASTP svg
NC_003197:27207262720726274079420069Salmonella typhimurium LT2, complete genome02252BLASTN svgBLASTP svg
NC_010067:191190*19119023335342164Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete02135BLASTN svgBLASTP svg
NC_004631:948054*94805498991041857Salmonella enterica subsp. enterica serovar Typhi Ty2, complete02083BLASTN svgBLASTP svg
NC_011149:1987291*1987291203423646946Salmonella enterica subsp. enterica serovar Agona str. SL483,02002BLASTN svgBLASTP svg
NC_010067:25297502529750259435464605Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete01788BLASTN svgBLASTP svg
NC_006511:44654954465495449196526471Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC01590BLASTN svgBLASTP svg
NC_015663:770485*77048579596825484Enterobacter aerogenes KCTC 2190 chromosome, complete genome01441BLASTN svgBLASTP svg
NC_009648:14876921487692151904531354Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome01191BLASTN svgBLASTP svg
NC_003198:22978372297837232227924443Salmonella enterica subsp. enterica serovar Typhi str. CT18,01140BLASTN svgBLASTP svg
NC_004631:685357*68535771085325497Salmonella enterica subsp. enterica serovar Typhi Ty2, complete01140BLASTN svgBLASTP svg
NC_010102:683444*68344472210838665Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,01140BLASTN svgBLASTP svg
NC_011083:23750612375061241289137831Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,01132BLASTN svgBLASTP svg
NC_003197:23274742327474236419536722Salmonella typhimurium LT2, complete genome01132BLASTN svgBLASTP svg
NC_011080:23426722342672236709924428Salmonella enterica subsp. enterica serovar Newport str. SL254,01124BLASTN svgBLASTP svg
NC_006905:23552902355290237961224323Salmonella enterica subsp. enterica serovar Choleraesuis str01124BLASTN svgBLASTP svg
NC_011149:1236689*1236689125609919411Salmonella enterica subsp. enterica serovar Agona str. SL483,01106BLASTN svgBLASTP svg
NC_011149:44740124474012449847024459Salmonella enterica subsp. enterica serovar Agona str. SL483,01080BLASTN svgBLASTP svg
NC_010067:51000510007450923510Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete0930BLASTN svgBLASTP svg
NC_010067:2304313*2304313233059926287Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete0870BLASTN svgBLASTP svg
NC_013716:2139952*2139952219678356832Citrobacter rodentium ICC168, complete genome0791BLASTN svgBLASTP svg
NC_009792:80833280833283532926998Citrobacter koseri ATCC BAA-895, complete genome3e-164587BLASTN svgBLASTP svg
NC_004631:4687270*4687270471022622957Salmonella enterica subsp. enterica serovar Typhi Ty2, complete4e-163583BLASTN svgBLASTP svg
NC_003198:4676536*4676536471603539500Salmonella enterica subsp. enterica serovar Typhi str. CT18,4e-163583BLASTN svgBLASTP svg
NC_012779:33168773316877333727020394Edwardsiella ictaluri 93-146, complete genome2e-159571BLASTN svgBLASTP svg
NC_015567:34650034650038359937100Serratia sp. AS9 chromosome, complete genome4e-151543BLASTN svgBLASTP svg
NC_015566:34508434508438359938516Serratia sp. AS12 chromosome, complete genome4e-151543BLASTN svgBLASTP svg
NC_010468:1816359*1816359186342947071Escherichia coli ATCC 8739, complete genome1e-147531BLASTN svgBLASTP svg
NC_004431:2185750*2185750224915063401Escherichia coli CFT073, complete genome4e-123450BLASTN svgBLASTP svg
NC_008253:1938975*1938975200160362629Escherichia coli 536, complete genome4e-123450BLASTN svgBLASTP svg
NC_013850:1753716*1753716178468730972Klebsiella variicola At-22 chromosome, complete genome4e-123450BLASTN svgBLASTP svg
NC_013508:31889783188978324937660399Edwardsiella tarda EIB202, complete genome2e-119438BLASTN svgBLASTP svg
NC_010102:997417*997417101802320607Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,6e-119436BLASTN svgBLASTP svg
NC_010473:2119480*2119480215635336874Escherichia coli str. K-12 substr. DH10B, complete genome2e-116428BLASTN svgBLASTP svg
NC_000913:2042935*2042935206659923665Escherichia coli K12, complete genome2e-116428BLASTN svgBLASTP svg
AC_000091:2027648*2027648207009942452Escherichia coli W3110 DNA, complete genome2e-116428BLASTN svgBLASTP svg
NC_009800:2083465*2083465210667323209Escherichia coli HS, complete genome5e-107396BLASTN svgBLASTP svg
NC_013421:1696746*1696746172309926354Pectobacterium wasabiae WPP163, complete genome1e-86329BLASTN svgBLASTP svg
NC_012880:2871480*2871480289700125522Dickeya dadantii Ech703, complete genome1e-83319BLASTN svgBLASTP svg
NC_011740:1991941*1991941201386221922Escherichia fergusonii ATCC 35469, complete genome1e-83319BLASTN svgBLASTP svg
CP002185:2181936*2181936220473822803Escherichia coli W, complete genome6e-79303BLASTN svgBLASTP svg
CP002516:1902431*1902431192618823758Escherichia coli KO11, complete genome6e-79303BLASTN svgBLASTP svg
CU928160:2091249*2091249211444123193Escherichia coli IAI1 chromosome, complete genome6e-79303BLASTN svgBLASTP svg
NC_000913:2028472*2028472205003821567Escherichia coli K12, complete genome6e-79303BLASTN svgBLASTP svg
NC_004547:3207776*3207776324611038335Erwinia carotovora subsp. atroseptica SCRI1043, complete genome9e-75289BLASTN svgBLASTP svg
NC_021066:601029*60102962413023102Raoultella ornithinolytica B6, complete genome1e-73285BLASTN svgBLASTP svg
NC_004547:1873390*1873390193737663987Erwinia carotovora subsp. atroseptica SCRI1043, complete genome3e-65258BLASTN svgBLASTP svg
NC_012214:1650523*1650523168104730525Erwinia pyrifoliae Ep1/96, complete genome3e-62248BLASTN svgBLASTP svg
NC_013592:2968500*2968500300769039191Dickeya dadantii Ech586, complete genome1e-61246BLASTN svgBLASTP svg
NC_015663:4906652*4906652493024623595Enterobacter aerogenes KCTC 2190 chromosome, complete genome1e-61246BLASTN svgBLASTP svg
NC_011149:20403962040396206929628901Salmonella enterica subsp. enterica serovar Agona str. SL483,1e-52216BLASTN svgBLASTP svg
NC_014837:2758239*2758239277859920361Pantoea sp. At-9b chromosome, complete genome3e-50208BLASTN svgBLASTP svg
NC_015566:3417951*3417951345859940649Serratia sp. AS12 chromosome, complete genome4e-49204BLASTN svgBLASTP svg
NC_020181:527592*52759257518147590Enterobacter aerogenes EA1509E, complete genome2e-48202BLASTN svgBLASTP svg
CP002797:2062006*2062006208330121296Escherichia coli NA114, complete genome2e-48202BLASTN svgBLASTP svg
AP010958:2455052*2455052247359918548Escherichia coli O103:H2 str. 12009 DNA, complete genome2e-48202BLASTN svgBLASTP svg
NC_003143:1973867*1973867199917525309Yersinia pestis CO92, complete genome3e-47198BLASTN svgBLASTP svg
NC_006155:1916426*1916426195791941494Yersinia pseudotuberculosis IP 32953, complete genome3e-47198BLASTN svgBLASTP svg
NC_008149:2652825*2652825267618023356Yersinia pestis Nepal516, complete genome3e-47198BLASTN svgBLASTP svg
NC_010159:1710268*1710268173543325166Yersinia pestis Angola, complete genome3e-47198BLASTN svgBLASTP svg
NC_010634:1916000*1916000195790341904Yersinia pseudotuberculosis PB1/+, complete genome3e-47198BLASTN svgBLASTP svg
NC_003143:2137945*2137945217709939155Yersinia pestis CO92, complete genome6e-45190BLASTN svgBLASTP svg
NC_004088:2640440*2640440268328342844Yersinia pestis KIM, complete genome6e-45190BLASTN svgBLASTP svg
NC_005810:1794490*1794490183441839929Yersinia pestis biovar Microtus str. 91001, complete genome6e-45190BLASTN svgBLASTP svg
NC_008150:1420825*1420825146012739303Yersinia pestis Antiqua, complete genome6e-45190BLASTN svgBLASTP svg
NC_010159:21645002164500220861544116Yersinia pestis Angola, complete genome6e-45190BLASTN svgBLASTP svg
NC_014500:1646854*1646854167518028327Dickeya dadantii 3937 chromosome, complete genome6e-45190BLASTN svgBLASTP svg
NC_020211:3398281*3398281342338225102Serratia marcescens WW4, complete genome6e-45190BLASTN svgBLASTP svg
NC_014500:1862000*1862000191726855269Dickeya dadantii 3937 chromosome, complete genome1e-43186BLASTN svgBLASTP svg
NC_012779:2928000*2928000295428726288Edwardsiella ictaluri 93-146, complete genome1e-43186BLASTN svgBLASTP svg
NC_012779:12865001286500132459938100Edwardsiella ictaluri 93-146, complete genome4e-43184BLASTN svgBLASTP svg
NC_015224:1914833*1914833193998525153Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,2e-42182BLASTN svgBLASTP svg
NC_013508:1289159*1289159133392244764Edwardsiella tarda EIB202, complete genome2e-42182BLASTN svgBLASTP svg
NC_007712:1893066*1893066191459921534Sodalis glossinidius str. 'morsitans', complete genome6e-42180BLASTN svgBLASTP svg
NC_012912:1701231*1701231174963148401Dickeya zeae Ech1591, complete genome2e-41178BLASTN svgBLASTP svg
NC_013592:1668092*1668092170683538744Dickeya dadantii Ech586, complete genome2e-41178BLASTN svgBLASTP svg
NC_014500:3097362*3097362318793090569Dickeya dadantii 3937 chromosome, complete genome2e-41178BLASTN svgBLASTP svg
NC_012912:2901021*2901021292518824168Dickeya zeae Ech1591, complete genome4e-40174BLASTN svgBLASTP svg
NC_014837:2709813*2709813273364723835Pantoea sp. At-9b chromosome, complete genome1e-39172BLASTN svgBLASTP svg
NC_014562:1883517*1883517190910525589Pantoea vagans C9-1 chromosome, complete genome2e-38168BLASTN svgBLASTP svg
NC_012779:2755338*2755338278000524668Edwardsiella ictaluri 93-146, complete genome4e-37165BLASTN svgBLASTP svg
NC_014306:3006028*3006028304213136104Erwinia billingiae Eb661, complete genome2e-35159BLASTN svgBLASTP svg
NC_011083:1993672*1993672201930525634Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,9e-35157BLASTN svgBLASTP svg
NC_010102:11372471137247116298725741Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,9e-35157BLASTN svgBLASTP svg
NC_003197:1945858*1945858197472828871Salmonella typhimurium LT2, complete genome9e-35157BLASTN svgBLASTP svg
NC_013716:4306695*4306695439827491580Citrobacter rodentium ICC168, complete genome1e-33153BLASTN svgBLASTP svg
NC_011080:1944226*1944226198035236127Salmonella enterica subsp. enterica serovar Newport str. SL254,2e-32149BLASTN svgBLASTP svg
NC_010498:12101451210145123409923955Escherichia coli SMS-3-5, complete genome3e-25125BLASTN svgBLASTP svg
NC_009800:20493462049346207518725842Escherichia coli HS, complete genome3e-25125BLASTN svgBLASTP svg
NC_008563:20413452041345206368122337Escherichia coli APEC O1, complete genome3e-25125BLASTN svgBLASTP svg
NC_002695:30193930193932873026792Escherichia coli O157:H7 str. Sakai, complete genome3e-25125BLASTN svgBLASTP svg
NC_002655:30194030194032759925660Escherichia coli O157:H7 EDL933, complete genome3e-25125BLASTN svgBLASTP svg
AP010958:22729192272919229869725779Escherichia coli O103:H2 str. 12009 DNA, complete genome3e-25125BLASTN svgBLASTP svg
NC_002655:27306592730659276187131213Escherichia coli O157:H7 EDL933, complete genome1e-24123BLASTN svgBLASTP svg
NC_002695:26554452655445267786922425Escherichia coli O157:H7 str. Sakai, complete genome1e-24123BLASTN svgBLASTP svg
NC_004337:20359452035945205669020746Shigella flexneri 2a str. 301, complete genome1e-24123BLASTN svgBLASTP svg
NC_004741:20097692009769203209922331Shigella flexneri 2a str. 2457T, complete genome1e-24123BLASTN svgBLASTP svg
NC_008258:2045000*2045000206275017751Shigella flexneri 5 str. 8401, complete genome1e-24123BLASTN svgBLASTP svg
NC_009801:21591232159123218213823016Escherichia coli E24377A, complete genome1e-24123BLASTN svgBLASTP svg
NC_009348:2631759*2631759265138819630Aeromonas salmonicida subsp. salmonicida A449, complete genome5e-24121BLASTN svgBLASTP svg
NC_006511:10632491063249108659923351Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC5e-24121BLASTN svgBLASTP svg
NC_012779:25861752586175261323427060Edwardsiella ictaluri 93-146, complete genome5e-21111BLASTN svgBLASTP svg
NC_007613:10380001038000106059922600Shigella boydii Sb227, complete genome2e-20109BLASTN svgBLASTP svg
NC_005955:1166521*1166521119028523765Bartonella quintana str. Toulouse, complete genome7e-20107BLASTN svgBLASTP svg
NC_006905:13424741342474137811135638Salmonella enterica subsp. enterica serovar Choleraesuis str1e-18103BLASTN svgBLASTP svg
NC_011184:2421687*2421687244877527089Vibrio fischeri MJ11 chromosome I, complete sequence7e-1797.6BLASTN svgBLASTP svg
NC_013421:18190361819036185909940064Pectobacterium wasabiae WPP163, complete genome3e-1695.6BLASTN svgBLASTP svg
NC_010102:18293571829357185417624820Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,1e-1593.7BLASTN svgBLASTP svg
NC_010694:12508411250841127452923689Erwinia tasmaniensis, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_006511:12438171243817126629922483Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC4e-1591.7BLASTN svgBLASTP svg
NC_010465:62348*6234810809945752Yersinia pseudotuberculosis YPIII, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_010067:4418000*4418000444281924820Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete7e-1487.7BLASTN svgBLASTP svg
NC_010067:1829041*1829041185794928909Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete7e-1487.7BLASTN svgBLASTP svg
NC_010102:17797071779707181158331877Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,3e-1385.7BLASTN svgBLASTP svg
NC_009651:19909199094332823420Klebsiella pneumoniae subsp. pneumoniae MGH 78578 plasmid pKPN5,1e-1283.8BLASTN svgBLASTP svg
NC_009140:121107*12110714459223486Salmonella enterica enterica sv Newport str. SL254, complete1e-1283.8BLASTN svgBLASTP svg
NC_008253:20567342056734207917122438Escherichia coli 536, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_007946:21554542155454218077025317Escherichia coli UTI89, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_004431:23042802304280233659932320Escherichia coli CFT073, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_003384:15715815715818443827281Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid1e-1283.8BLASTN svgBLASTP svg
NC_010410:36068263606826369540988584Acinetobacter baumannii AYE, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_010545:1781393*1781393180797326581Corynebacterium urealyticum DSM 7109, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_010611:24083924083927225731419Acinetobacter baumannii ACICU, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_011083:15243371524337154332418988Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,1e-1283.8BLASTN svgBLASTP svg
NC_011751:49925004992500501338720888Escherichia coli UMN026 chromosome, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_014107:17117017117019899927830Enterobacter cloacae subsp. cloacae ATCC 13047 plasmid pECL_A,1e-1283.8BLASTN svgBLASTP svg
NC_014932:1232346*1232346130968277337Bartonella clarridgeiae 73, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_020181:42194142194144800526065Enterobacter aerogenes EA1509E, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_006856:26438*264384625619819Salmonella enterica subsp. enterica serovar Choleraesuis str1e-1283.8BLASTN svgBLASTP svg
NC_011080:11669511166951119330926359Salmonella enterica subsp. enterica serovar Newport str. SL254,4e-1281.8BLASTN svgBLASTP svg
NC_010939:1986263*1986263202856742305Actinobacillus pleuropneumoniae serovar 7 str. AP76, complete2e-1179.8BLASTN svgBLASTP svg
NC_009053:1942973*1942973197934536373Actinobacillus pleuropneumoniae L20, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_010102:93105593105595414223088Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,3e-1075.8BLASTN svgBLASTP svg
NC_009649:16907169074359926693Klebsiella pneumoniae subsp. pneumoniae MGH 78578 plasmid pKPN3,3e-1075.8BLASTN svgBLASTP svg
NC_011080:2761403*2761403277959918197Salmonella enterica subsp. enterica serovar Newport str. SL254,1e-0973.8BLASTN svgBLASTP svg
NC_010694:21380002138000218529147292Erwinia tasmaniensis, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_012912:16707841670784169159920816Dickeya zeae Ech1591, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_015424:16895001689500172544435945Aeromonas veronii B565 chromosome, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_006905:368942*36894239327424333Salmonella enterica subsp. enterica serovar Choleraesuis str6e-0867.9BLASTN svgBLASTP svg
NC_014394:707305*70730573388526581Gallionella capsiferriformans ES-2 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_013421:27205002720500274898028481Pectobacterium wasabiae WPP163, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_012559:85450785450789459940093Laribacter hongkongensis HLHK9, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007298:1129889*1129889115580225914Dechloromonas aromatica RCB, complete genome2e-0765.9BLASTN svgBLASTP svg
AC_000091:16270491627049165562928581Escherichia coli W3110 DNA, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_000913:1625500*1625500165193926440Escherichia coli K12, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_010473:1712984*1712984174109928116Escherichia coli str. K-12 substr. DH10B, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_010694:436500*43650046233725838Erwinia tasmaniensis, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_011740:27374672737467275914021674Escherichia fergusonii ATCC 35469, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_011751:13774571377457140058923133Escherichia coli UMN026 chromosome, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_020181:2097066*2097066212464227577Enterobacter aerogenes EA1509E, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_008781:19738261973826199696823143Polaromonas naphthalenivorans CJ2, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_008253:3941938*3941938399883856901Escherichia coli 536, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_004851:15767515767518009922425Shigella flexneri 2a str. 301 plasmid pCP301, complete sequence4e-0661.9BLASTN svgBLASTP svg