Pre_GI Gene

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Host: NC_011149 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011149:1236689 Salmonella enterica subsp. enterica serovar Agona str. SL483,

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella enterica subsp. enterica serovar Agona causes gastroenteritis in humans and is also pathogenic to swine and other food animals. This serovar is able to contain the Salmonella genomic island 1 multidrug resistance gene cluster. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
12366891237048360integraseQuickGO ontologyBLASTP
12370511237185135bacteriophage tail fiber assembly proteinQuickGO ontology
123739412397242331leucine-rich repeat proteinQuickGO ontologyBLASTP
12397311240408678transposase Mutator familyQuickGO ontologyBLASTP
12408071240953147hypothetical proteinBLASTP
12411761241370195hypothetical proteinBLASTP
12414821241919438putative acetyltransferaseQuickGO ontologyBLASTP
12430601243479420helix-turn-helix domain proteinQuickGO ontologyBLASTP
12434761243787312Sea40QuickGO ontologyBLASTP
12439331244265333hypothetical proteinBLASTP
12445641245508945hypothetical proteinBLASTP
12457091245858150hypothetical cytosolic proteinQuickGO ontology
12460131246489477hypothetical proteinBLASTP
12468181247198381putative cytoplasmic proteinQuickGO ontologyBLASTP
12474851247616132hypothetical proteinBLASTP
12476101247846237hypothetical protein
12479131248098186hypothetical protein
12481561248620465guanine nucleotide exchange factor SopEQuickGO ontologyBLASTP
12486941248819126hypothetical protein
12489051249069165hypothetical proteinBLASTP
12491021249275174hypothetical proteinBLASTP
12492931249943651serinethreonine-protein phosphatase 1QuickGO ontologyBLASTP
12499621250096135hypothetical proteinBLASTP
12502641250503240hypothetical proteinBLASTP
125061812520571440ribosomal RNA small subunit methyltransferase FQuickGO ontologyBLASTP
125213512547682634mce-related proteinQuickGO ontologyBLASTP
125473712560201284integral membrane protein PqiA familyQuickGO ontologyBLASTP