Pre_GI Gene

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Host: NC_006856 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_006856:26438 Salmonella enterica subsp. enterica serovar Choleraesuis str

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a 58-year old man with sepsis and has been shown to be resistant to ciprofloxacin and ceftriaxone. This organism also causes severe disease (swine paratyphoid) in pigs. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
2643826785348ORF3-QacEdelta1 fusion proteinQuickGO ontologyBLASTP
2677927618840dihydropteroate synthetase typeIQuickGO ontologyBLASTP
2774628246501SulI3QuickGO ontologyBLASTP
2821529207993NTP-binding proteinQuickGO ontologyBLASTP
2922029912693putative transposaseQuickGO ontologyBLASTP
2936730089723TnpAQuickGO ontologyBLASTP
30035316271593hypothetical proteinBLASTP
3162432112489hypothetical proteinBLASTP
3210533058954hypothetical proteinBLASTP
3309233997906hypothetical proteinBLASTP
3427534475201hypothetical proteinBLASTP
3446935191723transposaseQuickGO ontologyBLASTP
3525035489240macrolide-efflux determinantQuickGO ontologyBLASTP
3563536498864short chain dehydrogenaseQuickGO ontologyBLASTP
3653636781246hypothetical proteinBLASTP
3725038041792dihydropteroate synthaseQuickGO ontologyBLASTP
3828838974687transposaseQuickGO ontologyBLASTP
3922139553333quaternary ammonium compound resistance proteinQuickGO ontologyBLASTP
3972340514792aminoglycoside adenyltransferaseQuickGO ontologyBLASTP
40607418661260chloramphenicol resistance proteinQuickGO ontologyBLASTP
4212842931804streptomycin 3-adenyl transferaseQuickGO ontologyBLASTP
4297743585609hypothetical proteinBLASTP
43681447601080streptothricin acetyl-transferaseQuickGO ontologyBLASTP
44690457031014integraseQuickGO ontologyBLASTP
4564846256609TnpMQuickGO ontologyBLASTP