Pre_GI Gene

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Host: NC_006905 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_006905:1342474 Salmonella enterica subsp. enterica serovar Choleraesuis str

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a 58-year old man with sepsis and has been shown to be resistant to ciprofloxacin and ceftriaxone. This organism also causes severe disease (swine paratyphoid) in pigs. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
134247413458363363Gifsy-1 prophage VhsJQuickGO ontologyBLASTP
13458751346117243hypothetical proteinBLASTP
134617113488492679side tail fiber proteinQuickGO ontologyBLASTP
13465871347102516unknown protein encoded by prophage CP-933XQuickGO ontology
13485751348838264hypothetical protein
13488641349382519hypothetical prophage proteinQuickGO ontologyBLASTP
13504811350789309hypothetical proteinBLASTP
135092013519901071SopB proteinQuickGO ontologyBLASTP
13519551352248294hypothetical proteinBLASTP
135298513546731689Periplasmic murein peptide-binding protein precursQuickGO ontologyBLASTP
13548921355857966hypothetical proteinBLASTP
13559021356051150hypothetical protein
13566051356958354hypothetical protein
13570891357265177isocitrate dehydrogenase in e14 prophage specific for NADPQuickGO ontologyBLASTP
135771313587981086putative cytoplasmic proteinQuickGO ontologyBLASTP
13589911359317327hypothetical proteinBLASTP
13592861359501216hypothetical proteinBLASTP
13598231360611789putative envelope lipoproteinQuickGO ontologyBLASTP
13611011361340240Macrophage survival gene reduced mouse virulenceQuickGO ontologyBLASTP
13615301362051522putative envelope proteinQuickGO ontologyBLASTP
13624661362678213cold shock protein-like proteinQuickGO ontologyBLASTP
13628101363139330PhoP regulatedQuickGO ontologyBLASTP
13638851364442558PhoP regulated reduced macrophage survivalQuickGO ontologyBLASTP
13656641366008345putative periplasmic proteinQuickGO ontologyBLASTP
1366077136616690conserved protein in the LexA regulonQuickGO ontologyBLASTP
1366221136631090putative periplasmic proteinQuickGO ontologyBLASTP
13663861366511126putative lipoproteinQuickGO ontologyBLASTP
13666431366816174hypothetical proteinBLASTP
13671321367602471putative molecular chaperone small heat shock proteinQuickGO ontologyBLASTP
13677111367860150putative inner membrane proteinQuickGO ontologyBLASTP
136794113689841044putative cytoplasmic proteinQuickGO ontologyBLASTP
13690691369596528putative inner membrane proteinQuickGO ontologyBLASTP
13697451370059315putative outer membrane lipoproteinQuickGO ontologyBLASTP
137074113723811641putative ABC transporter periplasmic binding proteinQuickGO ontologyBLASTP
13723781373355978putative ABC transporterQuickGO ontologyBLASTP
13733451374157813putative ABC transporterQuickGO ontologyBLASTP
13741511374948798putative ATPase component of ABC-type transport system contain duplicated ATPase domainQuickGO ontologyBLASTP
13749421375532591putative ATPase component of ABC-type transport system contain duplicated ATPase domainQuickGO ontologyBLASTP
137561413767471134putative inner membrane proteinQuickGO ontologyBLASTP
13769411377267327putative cytoplasmic proteinQuickGO ontologyBLASTP
13774611378111651putative periplasmic proteinQuickGO ontologyBLASTP