Pre_GI Gene

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Host: NC_009140 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009140:121107 Salmonella enterica enterica sv Newport str. SL254, complete

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella enterica subsp. enterica serovar Newport is common worldwide. Outbreak investigations and targeted studies have identified dairy cattle as the main reservoir this serotype. The SL254 strain is an MDR strain from one of two distinct lineages of the Newport serovar. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
1211071240792973transposase TnpA for transposon Tn21QuickGO ontologyBLASTP
1249451259581014integrase IntI1 for transposon Tn21QuickGO ontologyBLASTP
1258881268951008aminoglycoside resistance proteinQuickGO ontologyBLASTP
127059127961903aminoglycoside 3-N-acetyltransferaseQuickGO ontologyBLASTP
12816812848832110 kDa chaperonin GroSQuickGO ontologyBLASTP
1285441301811638chaperonin GroELQuickGO ontologyBLASTP
1303701318991530transposase InsEQuickGO ontologyBLASTP
1321671334021236transposase InsFQuickGO ontologyBLASTP
133620133967348quaternary ammonium compound-resistance protein QacEdelta1QuickGO ontologyBLASTP
133961134800840dihydropteroate synthaseQuickGO ontologyBLASTP
134928135428501hypothetical proteinBLASTP
135452135739288hypothetical proteinBLASTP
135963136745783transposition protein IstB for insertion sequence IS1326QuickGO ontologyBLASTP
1367351382581524transposase IstA for insertion sequence IS1326QuickGO ontologyBLASTP
1383811399251545transposase InsG for insertion sequence IS1353QuickGO ontologyBLASTP
139976140836861transposition protein TniBQuickGO ontologyBLASTP
141327142049723transposase InsB3 for insertion sequence IS26QuickGO ontologyBLASTP
142094142816723transposase InsB4 for insertion sequence IS26QuickGO ontologyBLASTP
143008143997990EAL domain-containing protein Urf2QuickGO ontologyBLASTP
143994144230237putative mercury resistance proteinQuickGO ontologyBLASTP
144227144592366transcriptional regulator MerDQuickGO ontologyBLASTP