Pre_GI Gene

Some Help

Host: NC_008253 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008253:2056734 Escherichia coli 536, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (536; O6:K15:H31) is a uropathogenic Escherichia coli (UPEC) that was isolated from a patient with acute pyelonephritis (inflammation of the kidney and pelvis). This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
205673420663549621putative polyketide synthaseQuickGO ontologyBLASTP
20663932066581189hypothetical protein
20667882067000213putative transcriptional regulatorQuickGO ontologyBLASTP
20670012067735735probable 4-phosphopantetheinyl transferaseQuickGO ontologyBLASTP
20678812068147267IS1400 transposase AQuickGO ontologyBLASTP
20682522068731480IS1400 transposase BQuickGO ontologyBLASTP
20687222068949228putative transposaseQuickGO ontologyBLASTP
20690392069452414hypothetical proteinBLASTP
20694802069707228hypothetical proteinBLASTP
20697562070691936protein ErfKSrfK precursorQuickGO ontologyBLASTP
207075320718321080nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferaseQuickGO ontologyBLASTP
20718442072587744cobalamin 5-phosphate synthaseQuickGO ontologyBLASTP
20725842073129546cobalamin biosynthesis protein CobUQuickGO ontologyBLASTP
20735942073758165hypothetical proteinBLASTP
20744972074694198hypothetical protein
207480120769482148putative outer membrane receptor for iron compound or colicinQuickGO ontologyBLASTP
20769232077207285hypothetical proteinBLASTP
20773192077963645hypothetical proteinBLASTP
207794820791711224putative phosphoadenosine phosphosulfate reductaseQuickGO ontologyBLASTP