Pre_GI Gene

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Host: NC_008563 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008563:2041345 Escherichia coli APEC O1, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (serovar O1) is an avian pathogenic strain and causes respiratory, blood, and enteric infections primarily in poultry. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
204134520424901146Outer membrane protein N precursorQuickGO ontologyBLASTP
20430852043936852heat shock protein Hsp 31 subunit of Hsp31 homodimerQuickGO ontologyBLASTP
204404320454011359putative 2-component sensor proteinQuickGO ontologyBLASTP
20454012046183783putative 2-component transcriptional regulatorQuickGO ontologyBLASTP
20462052046618414hypothetical proteinBLASTP
204672720477311005YedYQuickGO ontologyBLASTP
20477322048367636YedZQuickGO ontologyBLASTP
20489272049274348YodAQuickGO ontologyBLASTP
20493102049639330hypothetical proteinBLASTP
20508632051642780hypothetical proteinBLASTP
20517222052057336hypothetical proteinBLASTP
20521502052428279hypothetical proteinBLASTP
205242520544912067hypothetical proteinBLASTP
205454420580263483putative tail component of prophageQuickGO ontologyBLASTP
20580872058758672tail assembly protein IQuickGO ontologyBLASTP
20586562059399744tail assembly proteinQuickGO ontologyBLASTP
20593982060108711hypothetical proteinBLASTP
20601022060443342putative minor tail proteinQuickGO ontologyBLASTP
206043620636813246phage-related minor tail proteinQuickGO ontologyBLASTP