Pre_GI Gene

Some Help

Host: NC_006905 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_006905:2355290 Salmonella enterica subsp. enterica serovar Choleraesuis str

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a 58-year old man with sepsis and has been shown to be resistant to ciprofloxacin and ceftriaxone. This organism also causes severe disease (swine paratyphoid) in pigs. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
23577592358163405bacteriophage tail fiber assembly protein pseudogeneQuickGO ontologyBLASTP
23582042358995792putative tail fiber protein of phageQuickGO ontologyBLASTP
23590872359269183hypothetical protein
23592412359501261homolog of virulence protein MsgAQuickGO ontologyBLASTP
23596932360250558putative outer membrane proteinQuickGO ontologyBLASTP
23609862361633648response regulator in two-component regulatory system with NarQ or NarXQuickGO ontologyBLASTP
236167723627201044putative heme lyase subunit cytochrome c-type biogenesisQuickGO ontologyBLASTP
23627172363274558heme lyase disulfide oxidoreductase cytocyhrome c-type biogenesisQuickGO ontologyBLASTP
236327123652021932cytochrome c-type biogenesis proteinQuickGO ontologyBLASTP
23651992365678480periplasmic heme-dependent peroxidase cytochrome c-type biogenesis proteinQuickGO ontologyBLASTP
23656752365887213heme exporter protein C cytochrome c-type biogenesis proteinQuickGO ontologyBLASTP
23658842366630747ABC superfamily membrane heme exporter protein cytochrome c-type biogenesis proteinQuickGO ontologyBLASTP
23666732367332660ABC superfamily membrane heme exporter protein cytochrome c-type biogenesis proteinQuickGO ontologyBLASTP
23673292367946618ABC superfamily atp_bind heme exporter protein cytochrome c-type biogenesis proteinQuickGO ontologyBLASTP
23679672368569603periplasmic nitrate reductase cytochrome c-type proteinQuickGO ontologyBLASTP
23685792369028450periplasmic nitrate reductase small subunit cytochrome C550 in complex with NapAQuickGO ontologyBLASTP
23691442370013870quinol dehydrogenase membrane componentQuickGO ontologyBLASTP
23700002370695696quinol dehydrogenase periplasmic componentQuickGO ontologyBLASTP
237070223731882487periplasmic nitrate reductase large subunit in complex with NapBQuickGO ontologyBLASTP
23731852373715531periplasmic nitrate reductaseQuickGO ontologyBLASTP
23743492374837489ecotin precursorQuickGO ontologyBLASTP
237504623766891644putative ABC-type multidrugproteinlipid transport system ATPase componentQuickGO ontologyBLASTP
23767652377415651DNA repair system specific for alkylated DNAQuickGO ontologyBLASTP
237741823784791062O6-methylguanine-DNA methyltransferase transcription activatorrepressor AraCXyl familyQuickGO ontologyBLASTP
237856023796121053putative thiamine biosynthesis lipoproteinQuickGO ontologyBLASTP