Pre_GI Gene

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Host: NC_010102 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010102:997417 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
9974179991471731hypothetical proteinBLASTP
99920410013722169hypothetical proteinBLASTP
10015821001737156hypothetical proteinBLASTP
10017151002263549hypothetical proteinBLASTP
10022821002413132hypothetical proteinBLASTP
10024011002580180hypothetical proteinBLASTP
10026561002844189hypothetical proteinBLASTP
10028881003412525hypothetical proteinBLASTP
1003578100365073tRNA-AsnQuickGO ontology
10037601003903144hypothetical proteinBLASTP
1003835100393399hypothetical proteinBLASTP
10039481004052105hypothetical proteinBLASTP
10040591004349291hypothetical proteinBLASTP
10045191004701183hypothetical proteinBLASTP
10047901005323534hypothetical proteinBLASTP
10053361005464129hypothetical protein
100546310068631401hypothetical proteinBLASTP
10068561007629774hypothetical proteinBLASTP
100762610122094584hypothetical proteinBLASTP
10122091013183975hypothetical proteinBLASTP
10132961014072777hypothetical proteinBLASTP
10140691014638570hypothetical proteinBLASTP
101464010180233384hypothetical proteinBLASTP