Pre_GI Gene

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Host: NC_011751 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011751:1377457 Escherichia coli UMN026 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolated from a woman with uncomplicated acute cystitis in 1999 in the USA. This strain is drug resistant. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
137587513774671593portal protein Head protein GP4QuickGO ontologyBLASTP
137745713789051449Head-tail preconnector protein GP5QuickGO ontologyBLASTP
13789421379289348Head decoration protein Head protein GPshpQuickGO ontologyBLASTP
137934713803751029Major head protein Head protein gp7QuickGO ontologyBLASTP
13803791380801423hypothetical proteinBLASTP
13807941381147354Tail attachment protein Minor capsid protein FIIQuickGO ontologyBLASTP
13811631381696534Minor tail protein Z GpZQuickGO ontologyBLASTP
13816931382088396Minor tail protein UQuickGO ontologyBLASTP
13820961382845750Major tail protein VQuickGO ontologyBLASTP
13828641383295432Minor tail protein GQuickGO ontologyBLASTP
13833221383735414Minor tail protein TQuickGO ontologyBLASTP
138371613862772562Minor tail protein HQuickGO ontologyBLASTP
13862741386603330Minor tail protein MQuickGO ontologyBLASTP
13865011386617117hypothetical proteinBLASTP
13866031387301699Minor tail protein LQuickGO ontologyBLASTP
13873121388055744tail fiber component KQuickGO ontologyBLASTP
13879531388633681Tail assembly protein IQuickGO ontologyBLASTP
138897713926693693Host specificity protein JQuickGO ontologyBLASTP
13927371393336600putative Lom-like outer membrane protein of phage originQuickGO ontologyBLASTP
139348813965143027Side tail fiber protein from bacteriophage originQuickGO ontologyBLASTP
13965141397098585putative tail fiber chaperone Qin prophageQuickGO ontologyBLASTP
13971531397737585putative AdoMet-dependent methyltransferase DLP12 prophageQuickGO ontologyBLASTP
13978781398144267putative tail fiber assembly proteinQuickGO ontologyBLASTP
13983761399239864spermidineputrescine ABC transporter membrane proteinQuickGO ontologyBLASTP
139922314003591137putrescinespermidine ABC transporter ATPase proteinQuickGO ontologyBLASTP
14003381400589252hypothetical proteinBLASTP